Protein–RNA interactions for Protein: P55774

CCL18, C-C motif chemokine 18, humanhuman

Predictions only

Length 89 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL18P55774 MVK-217ENST00000639206 367 ntTSL 5 BASIC10.18□□□□□ -0.78
CCL18P55774 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
CCL18P55774 AMER3-202ENST00000423981 6172 ntAPPRIS P1 TSL 4 BASIC10.18□□□□□ -0.78
CCL18P55774 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
CCL18P55774 APP-205ENST00000358918 2366 ntTSL 5 BASIC10.18□□□□□ -0.78
CCL18P55774 CNTNAP1-201ENST00000264638 5276 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
CCL18P55774 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
CCL18P55774 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC10.18□□□□□ -0.78
CCL18P55774 SNX33-201ENST00000308527 8008 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
CCL18P55774 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
CCL18P55774 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
CCL18P55774 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC10.18□□□□□ -0.78
CCL18P55774 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
CCL18P55774 RAPGEF1-201ENST00000372189 6085 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
CCL18P55774 SAMD4A-201ENST00000251091 6565 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
CCL18P55774 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
CCL18P55774 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
CCL18P55774 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC10.18□□□□□ -0.78
CCL18P55774 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
CCL18P55774 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC10.18□□□□□ -0.78
CCL18P55774 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC10.18□□□□□ -0.78
CCL18P55774 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC10.18□□□□□ -0.78
CCL18P55774 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC10.18□□□□□ -0.78
CCL18P55774 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC10.18□□□□□ -0.78
CCL18P55774 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC10.18□□□□□ -0.78
CCL18P55774 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC10.18□□□□□ -0.78
CCL18P55774 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
CCL18P55774 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
CCL18P55774 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
CCL18P55774 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
CCL18P55774 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC10.17□□□□□ -0.78
CCL18P55774 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC10.17□□□□□ -0.78
CCL18P55774 STOX2-201ENST00000308497 10458 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
CCL18P55774 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
CCL18P55774 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
CCL18P55774 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
CCL18P55774 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
CCL18P55774 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
CCL18P55774 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC10.17□□□□□ -0.78
CCL18P55774 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC10.17□□□□□ -0.78
CCL18P55774 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
CCL18P55774 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
CCL18P55774 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC10.17□□□□□ -0.78
CCL18P55774 SF1-209ENST00000433274 2317 ntTSL 2 BASIC10.17□□□□□ -0.78
CCL18P55774 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
CCL18P55774 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC10.17□□□□□ -0.78
CCL18P55774 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
CCL18P55774 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC10.17□□□□□ -0.78
CCL18P55774 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
CCL18P55774 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC10.17□□□□□ -0.78
CCL18P55774 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
CCL18P55774 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
CCL18P55774 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC10.17□□□□□ -0.78
CCL18P55774 HECTD2-201ENST00000298068 4802 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
CCL18P55774 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC10.17□□□□□ -0.78
CCL18P55774 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC10.17□□□□□ -0.78
CCL18P55774 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
CCL18P55774 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
CCL18P55774 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
CCL18P55774 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
CCL18P55774 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
CCL18P55774 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC10.17□□□□□ -0.78
CCL18P55774 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC10.17□□□□□ -0.78
CCL18P55774 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
CCL18P55774 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
CCL18P55774 AL133466.1-201ENST00000447582 150 ntBASIC10.17□□□□□ -0.78
CCL18P55774 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
CCL18P55774 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC10.17□□□□□ -0.78
CCL18P55774 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC10.17□□□□□ -0.78
CCL18P55774 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC10.17□□□□□ -0.78
CCL18P55774 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
CCL18P55774 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC10.17□□□□□ -0.78
CCL18P55774 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
CCL18P55774 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
CCL18P55774 AC090164.2-201ENST00000611487 516 ntBASIC10.17□□□□□ -0.78
CCL18P55774 MIR6720-201ENST00000611664 98 ntBASIC10.17□□□□□ -0.78
CCL18P55774 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC10.17□□□□□ -0.78
CCL18P55774 AL139099.5-201ENST00000635274 300 ntBASIC10.17□□□□□ -0.78
CCL18P55774 NAP1L6-202ENST00000641404 1222 ntBASIC10.17□□□□□ -0.78
CCL18P55774 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC10.17□□□□□ -0.78
CCL18P55774 TTC39A-202ENST00000262676 6287 ntTSL 2 BASIC10.17□□□□□ -0.78
CCL18P55774 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
CCL18P55774 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
CCL18P55774 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC10.17□□□□□ -0.78
CCL18P55774 AC011474.4-201ENST00000623523 2076 ntBASIC10.17□□□□□ -0.78
CCL18P55774 ANKRD52-201ENST00000267116 8688 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
CCL18P55774 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
CCL18P55774 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
CCL18P55774 SLX4-201ENST00000294008 7307 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
CCL18P55774 USP20-201ENST00000315480 4458 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
CCL18P55774 IRAK1BP1-201ENST00000369940 5656 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
CCL18P55774 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
CCL18P55774 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
CCL18P55774 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
CCL18P55774 SLC46A1-207ENST00000612814 6376 ntAPPRIS P1 TSL 2 BASIC10.17□□□□□ -0.78
CCL18P55774 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
CCL18P55774 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
CCL18P55774 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
CCL18P55774 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC10.17□□□□□ -0.78
CCL18P55774 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms