Protein–RNA interactions for Protein: P55273

CDKN2D, Cyclin-dependent kinase 4 inhibitor D, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2DP55273 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC14.1□□□□□ -0.15
CDKN2DP55273 RCC2P1-201ENST00000452257 1476 ntBASIC14.1□□□□□ -0.15
CDKN2DP55273 RAN-210ENST00000541630 1475 ntTSL 2 BASIC14.1□□□□□ -0.15
CDKN2DP55273 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC14.1□□□□□ -0.15
CDKN2DP55273 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
CDKN2DP55273 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC14.1□□□□□ -0.15
CDKN2DP55273 AXL-203ENST00000593513 2557 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CDKN2DP55273 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CDKN2DP55273 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
CDKN2DP55273 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC14.1□□□□□ -0.15
CDKN2DP55273 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CDKN2DP55273 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CDKN2DP55273 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CDKN2DP55273 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CDKN2DP55273 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CDKN2DP55273 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CDKN2DP55273 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC14.1□□□□□ -0.15
CDKN2DP55273 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CDKN2DP55273 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CDKN2DP55273 PDCD6IPP2-206ENST00000566178 3351 ntTSL 5 BASIC14.09□□□□□ -0.15
CDKN2DP55273 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC14.09□□□□□ -0.15
CDKN2DP55273 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
CDKN2DP55273 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CDKN2DP55273 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CDKN2DP55273 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CDKN2DP55273 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
CDKN2DP55273 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CDKN2DP55273 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CDKN2DP55273 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
CDKN2DP55273 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
CDKN2DP55273 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CDKN2DP55273 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CDKN2DP55273 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC14.09□□□□□ -0.15
CDKN2DP55273 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC14.09□□□□□ -0.15
CDKN2DP55273 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CDKN2DP55273 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
CDKN2DP55273 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CDKN2DP55273 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
CDKN2DP55273 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC14.09□□□□□ -0.15
CDKN2DP55273 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC14.09□□□□□ -0.15
CDKN2DP55273 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC14.09□□□□□ -0.15
CDKN2DP55273 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
CDKN2DP55273 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CDKN2DP55273 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC14.09□□□□□ -0.15
CDKN2DP55273 AL583810.1-201ENST00000553344 1045 ntBASIC14.09□□□□□ -0.15
CDKN2DP55273 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC14.09□□□□□ -0.15
CDKN2DP55273 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC14.09□□□□□ -0.15
CDKN2DP55273 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC14.09□□□□□ -0.15
CDKN2DP55273 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC14.09□□□□□ -0.15
CDKN2DP55273 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC14.09□□□□□ -0.15
CDKN2DP55273 AC005695.3-201ENST00000614522 232 ntBASIC14.09□□□□□ -0.15
CDKN2DP55273 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
CDKN2DP55273 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CDKN2DP55273 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CDKN2DP55273 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC14.09□□□□□ -0.15
CDKN2DP55273 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC14.09□□□□□ -0.15
CDKN2DP55273 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
CDKN2DP55273 PSKH1-201ENST00000291041 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CDKN2DP55273 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CDKN2DP55273 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC14.09□□□□□ -0.15
CDKN2DP55273 AC018735.1-201ENST00000437208 1502 ntBASIC14.09□□□□□ -0.15
CDKN2DP55273 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
CDKN2DP55273 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
CDKN2DP55273 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC14.09□□□□□ -0.15
CDKN2DP55273 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC14.09□□□□□ -0.15
CDKN2DP55273 AC068760.1-201ENST00000493579 1953 ntBASIC14.09□□□□□ -0.15
CDKN2DP55273 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CDKN2DP55273 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CDKN2DP55273 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CDKN2DP55273 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CDKN2DP55273 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CDKN2DP55273 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CDKN2DP55273 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CDKN2DP55273 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC14.08□□□□□ -0.15
CDKN2DP55273 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.15
CDKN2DP55273 AC107918.4-201ENST00000641966 3141 ntBASIC14.08□□□□□ -0.15
CDKN2DP55273 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
CDKN2DP55273 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.15
CDKN2DP55273 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
CDKN2DP55273 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CDKN2DP55273 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CDKN2DP55273 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CDKN2DP55273 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
CDKN2DP55273 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CDKN2DP55273 AC061965.1-201ENST00000560524 1465 ntBASIC14.08□□□□□ -0.16
CDKN2DP55273 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC14.08□□□□□ -0.16
CDKN2DP55273 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CDKN2DP55273 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CDKN2DP55273 UROC1-201ENST00000290868 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CDKN2DP55273 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CDKN2DP55273 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CDKN2DP55273 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
CDKN2DP55273 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
CDKN2DP55273 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CDKN2DP55273 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC14.08□□□□□ -0.16
CDKN2DP55273 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CDKN2DP55273 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC14.08□□□□□ -0.16
CDKN2DP55273 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CDKN2DP55273 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC14.08□□□□□ -0.16
CDKN2DP55273 AL591846.1-201ENST00000451736 433 ntBASIC14.08□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms