Protein–RNA interactions for Protein: P55160

NCKAP1L, Nck-associated protein 1-like, humanhuman

Predictions only

Length 1,127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1LP55160 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NCKAP1LP55160 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC15.55■□□□□ 0.08
NCKAP1LP55160 AL583805.1-201ENST00000391389 531 ntBASIC15.55■□□□□ 0.08
NCKAP1LP55160 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC15.55■□□□□ 0.08
NCKAP1LP55160 LY6G6E-227ENST00000409239 776 ntAPPRIS ALT2 TSL 4 BASIC15.55■□□□□ 0.08
NCKAP1LP55160 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC15.55■□□□□ 0.08
NCKAP1LP55160 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC15.55■□□□□ 0.08
NCKAP1LP55160 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC15.55■□□□□ 0.08
NCKAP1LP55160 CEP164P1-201ENST00000455142 418 ntBASIC15.55■□□□□ 0.08
NCKAP1LP55160 AP000358.1-201ENST00000456260 156 ntBASIC15.55■□□□□ 0.08
NCKAP1LP55160 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
NCKAP1LP55160 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
NCKAP1LP55160 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC15.55■□□□□ 0.08
NCKAP1LP55160 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC15.55■□□□□ 0.08
NCKAP1LP55160 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
NCKAP1LP55160 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC15.55■□□□□ 0.08
NCKAP1LP55160 TP53-221ENST00000615910 1149 ntTSL 5 BASIC15.55■□□□□ 0.08
NCKAP1LP55160 AC009560.1-201ENST00000620208 434 ntBASIC15.55■□□□□ 0.08
NCKAP1LP55160 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NCKAP1LP55160 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC15.55■□□□□ 0.08
NCKAP1LP55160 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
NCKAP1LP55160 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
NCKAP1LP55160 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NCKAP1LP55160 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NCKAP1LP55160 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
NCKAP1LP55160 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC15.55■□□□□ 0.08
NCKAP1LP55160 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC15.55■□□□□ 0.08
NCKAP1LP55160 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
NCKAP1LP55160 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NCKAP1LP55160 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
NCKAP1LP55160 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NCKAP1LP55160 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
NCKAP1LP55160 SARS-202ENST00000369923 1882 ntTSL 5 BASIC15.54■□□□□ 0.08
NCKAP1LP55160 AL591122.2-201ENST00000624125 1853 ntBASIC15.54■□□□□ 0.08
NCKAP1LP55160 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC15.54■□□□□ 0.08
NCKAP1LP55160 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC15.54■□□□□ 0.08
NCKAP1LP55160 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC15.54■□□□□ 0.08
NCKAP1LP55160 AC093797.1-201ENST00000411847 1789 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
NCKAP1LP55160 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
NCKAP1LP55160 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NCKAP1LP55160 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
NCKAP1LP55160 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
NCKAP1LP55160 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
NCKAP1LP55160 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NCKAP1LP55160 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
NCKAP1LP55160 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC15.54■□□□□ 0.08
NCKAP1LP55160 AL161772.1-201ENST00000610494 4412 ntBASIC15.54■□□□□ 0.08
NCKAP1LP55160 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
NCKAP1LP55160 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
NCKAP1LP55160 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NCKAP1LP55160 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NCKAP1LP55160 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
NCKAP1LP55160 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC15.54■□□□□ 0.08
NCKAP1LP55160 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
NCKAP1LP55160 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC15.54■□□□□ 0.08
NCKAP1LP55160 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC15.54■□□□□ 0.08
NCKAP1LP55160 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC15.54■□□□□ 0.08
NCKAP1LP55160 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC15.54■□□□□ 0.08
NCKAP1LP55160 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC15.54■□□□□ 0.08
NCKAP1LP55160 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC15.54■□□□□ 0.08
NCKAP1LP55160 SIGLEC18P-201ENST00000602271 909 ntBASIC15.54■□□□□ 0.08
NCKAP1LP55160 AC007718.1-201ENST00000621078 280 ntBASIC15.54■□□□□ 0.08
NCKAP1LP55160 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC15.54■□□□□ 0.08
NCKAP1LP55160 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NCKAP1LP55160 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NCKAP1LP55160 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NCKAP1LP55160 SS18-201ENST00000269137 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NCKAP1LP55160 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
NCKAP1LP55160 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NCKAP1LP55160 YPEL4-201ENST00000300022 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NCKAP1LP55160 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
NCKAP1LP55160 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NCKAP1LP55160 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
NCKAP1LP55160 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
NCKAP1LP55160 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
NCKAP1LP55160 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
NCKAP1LP55160 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
NCKAP1LP55160 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC15.53■□□□□ 0.08
NCKAP1LP55160 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NCKAP1LP55160 KRT8P43-201ENST00000406052 1458 ntBASIC15.53■□□□□ 0.08
NCKAP1LP55160 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
NCKAP1LP55160 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
NCKAP1LP55160 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC15.53■□□□□ 0.08
NCKAP1LP55160 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NCKAP1LP55160 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
NCKAP1LP55160 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NCKAP1LP55160 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
NCKAP1LP55160 DSTN-203ENST00000474024 1853 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
NCKAP1LP55160 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC15.53■□□□□ 0.08
NCKAP1LP55160 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC15.53■□□□□ 0.08
NCKAP1LP55160 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
NCKAP1LP55160 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NCKAP1LP55160 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
NCKAP1LP55160 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NCKAP1LP55160 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NCKAP1LP55160 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NCKAP1LP55160 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC15.53■□□□□ 0.08
NCKAP1LP55160 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC15.53■□□□□ 0.08
NCKAP1LP55160 PPP1R2P4-201ENST00000424051 595 ntBASIC15.53■□□□□ 0.08
NCKAP1LP55160 RPL8P2-201ENST00000430538 502 ntBASIC15.53■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 76.8 ms