Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 CCT8L1P-201ENST00000465400 1674 ntBASIC10.49□□□□□ -0.73
APOC4P55056 DNAH10OS-201ENST00000514254 5040 ntAPPRIS P1 TSL 2 BASIC10.49□□□□□ -0.73
APOC4P55056 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
APOC4P55056 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
APOC4P55056 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
APOC4P55056 WARS-203ENST00000358655 2466 ntTSL 2 BASIC10.49□□□□□ -0.73
APOC4P55056 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
APOC4P55056 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
APOC4P55056 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC10.49□□□□□ -0.73
APOC4P55056 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC10.49□□□□□ -0.73
APOC4P55056 RN7SL832P-201ENST00000607781 1756 ntBASIC10.49□□□□□ -0.73
APOC4P55056 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC10.49□□□□□ -0.73
APOC4P55056 KRT8P31-201ENST00000504812 1408 ntBASIC10.49□□□□□ -0.73
APOC4P55056 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
APOC4P55056 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
APOC4P55056 CACNA1G-226ENST00000513689 6879 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
APOC4P55056 CACNA1G-231ENST00000515165 6870 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
APOC4P55056 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC10.49□□□□□ -0.73
APOC4P55056 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC10.48□□□□□ -0.73
APOC4P55056 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
APOC4P55056 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC10.48□□□□□ -0.73
APOC4P55056 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC10.48□□□□□ -0.73
APOC4P55056 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
APOC4P55056 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC10.48□□□□□ -0.73
APOC4P55056 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC10.48□□□□□ -0.73
APOC4P55056 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
APOC4P55056 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
APOC4P55056 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC10.48□□□□□ -0.73
APOC4P55056 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
APOC4P55056 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
APOC4P55056 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
APOC4P55056 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
APOC4P55056 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC10.48□□□□□ -0.73
APOC4P55056 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
APOC4P55056 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
APOC4P55056 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
APOC4P55056 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC10.48□□□□□ -0.73
APOC4P55056 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC10.48□□□□□ -0.73
APOC4P55056 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
APOC4P55056 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
APOC4P55056 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC10.48□□□□□ -0.73
APOC4P55056 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
APOC4P55056 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
APOC4P55056 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC10.48□□□□□ -0.73
APOC4P55056 PRKAR1A-203ENST00000392711 4327 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
APOC4P55056 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
APOC4P55056 AURKB-201ENST00000316199 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC10.48□□□□□ -0.73
APOC4P55056 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC10.48□□□□□ -0.73
APOC4P55056 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
APOC4P55056 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
APOC4P55056 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC10.48□□□□□ -0.73
APOC4P55056 AC073869.2-201ENST00000417338 1026 ntBASIC10.48□□□□□ -0.73
APOC4P55056 RPS9P1-201ENST00000419943 583 ntBASIC10.48□□□□□ -0.73
APOC4P55056 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC10.48□□□□□ -0.73
APOC4P55056 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC10.48□□□□□ -0.73
APOC4P55056 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC10.48□□□□□ -0.73
APOC4P55056 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC10.48□□□□□ -0.73
APOC4P55056 NEU3-205ENST00000531619 582 ntTSL 5 BASIC10.48□□□□□ -0.73
APOC4P55056 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC10.48□□□□□ -0.73
APOC4P55056 AC138701.2-201ENST00000553634 226 ntBASIC10.48□□□□□ -0.73
APOC4P55056 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
APOC4P55056 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC10.48□□□□□ -0.73
APOC4P55056 MIR3677-201ENST00000578964 60 ntBASIC10.48□□□□□ -0.73
APOC4P55056 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC10.48□□□□□ -0.73
APOC4P55056 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC10.48□□□□□ -0.73
APOC4P55056 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC10.48□□□□□ -0.73
APOC4P55056 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
APOC4P55056 COX6A1P2-201ENST00000620597 330 ntBASIC10.48□□□□□ -0.73
APOC4P55056 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC10.48□□□□□ -0.73
APOC4P55056 AC090505.1-201ENST00000430515 1834 ntBASIC10.48□□□□□ -0.73
APOC4P55056 BANP-201ENST00000286122 2368 ntTSL 5 BASIC10.48□□□□□ -0.73
APOC4P55056 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
APOC4P55056 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
APOC4P55056 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
APOC4P55056 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC10.48□□□□□ -0.73
APOC4P55056 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
APOC4P55056 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
APOC4P55056 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
APOC4P55056 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
APOC4P55056 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC10.48□□□□□ -0.73
APOC4P55056 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
APOC4P55056 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC10.48□□□□□ -0.73
APOC4P55056 ABI2-203ENST00000261018 6638 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
APOC4P55056 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
APOC4P55056 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC10.48□□□□□ -0.73
APOC4P55056 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC10.48□□□□□ -0.73
APOC4P55056 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
APOC4P55056 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
APOC4P55056 SNX33-201ENST00000308527 8008 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
APOC4P55056 PRDM10-202ENST00000358825 6322 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
APOC4P55056 PRDM10-203ENST00000360871 6301 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
APOC4P55056 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
APOC4P55056 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
APOC4P55056 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC10.48□□□□□ -0.73
APOC4P55056 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
APOC4P55056 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
APOC4P55056 FAM193A-201ENST00000324666 4846 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
APOC4P55056 YIPF6-201ENST00000374622 6134 ntTSL 2 BASIC10.47□□□□□ -0.73
APOC4P55056 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC10.47□□□□□ -0.73
APOC4P55056 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC10.47□□□□□ -0.73
Retrieved 100 of 98,524 protein–RNA pairs in 166 ms