Protein–RNA interactions for Protein: P48730

CSNK1D, Casein kinase I isoform delta, humanhuman

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1DP48730 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC14.21□□□□□ -0.13
CSNK1DP48730 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CSNK1DP48730 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
CSNK1DP48730 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
CSNK1DP48730 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CSNK1DP48730 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
CSNK1DP48730 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CSNK1DP48730 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
CSNK1DP48730 TCEA3-201ENST00000374601 1197 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CSNK1DP48730 UFM1-202ENST00000379649 846 ntTSL 4 BASIC14.21□□□□□ -0.13
CSNK1DP48730 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CSNK1DP48730 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC14.21□□□□□ -0.13
CSNK1DP48730 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CSNK1DP48730 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC14.21□□□□□ -0.13
CSNK1DP48730 AL627422.1-201ENST00000434104 580 ntBASIC14.21□□□□□ -0.13
CSNK1DP48730 ALKBH2-203ENST00000440112 574 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CSNK1DP48730 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC14.21□□□□□ -0.13
CSNK1DP48730 SPRY4-AS1-203ENST00000443800 566 ntTSL 3 BASIC14.21□□□□□ -0.13
CSNK1DP48730 TIMP1-205ENST00000456754 1095 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CSNK1DP48730 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC14.21□□□□□ -0.13
CSNK1DP48730 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC14.21□□□□□ -0.13
CSNK1DP48730 RNA5SP423-201ENST00000517127 109 ntBASIC14.21□□□□□ -0.13
CSNK1DP48730 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CSNK1DP48730 POLD4-208ENST00000532830 904 ntTSL 3 BASIC14.21□□□□□ -0.13
CSNK1DP48730 PRKXP1-201ENST00000561423 1122 ntBASIC14.21□□□□□ -0.13
CSNK1DP48730 AC145285.5-201ENST00000562217 361 ntBASIC14.21□□□□□ -0.13
CSNK1DP48730 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC14.21□□□□□ -0.13
CSNK1DP48730 MIR4522-201ENST00000584932 87 ntBASIC14.21□□□□□ -0.13
CSNK1DP48730 HCG18-245ENST00000602550 559 ntTSL 4 BASIC14.21□□□□□ -0.13
CSNK1DP48730 LINC01746-201ENST00000621390 449 ntTSL 3 BASIC14.21□□□□□ -0.13
CSNK1DP48730 AL353726.2-201ENST00000623259 884 ntBASIC14.21□□□□□ -0.13
CSNK1DP48730 AL121956.4-201ENST00000629925 581 ntTSL 5 BASIC14.21□□□□□ -0.13
CSNK1DP48730 AL139424.3-202ENST00000641619 917 ntBASIC14.21□□□□□ -0.13
CSNK1DP48730 AC067750.1-201ENST00000608826 6545 ntBASIC14.21□□□□□ -0.13
CSNK1DP48730 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
CSNK1DP48730 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CSNK1DP48730 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CSNK1DP48730 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CSNK1DP48730 KCNIP1-210ENST00000636734 1613 ntTSL 5 BASIC14.21□□□□□ -0.13
CSNK1DP48730 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CSNK1DP48730 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CSNK1DP48730 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CSNK1DP48730 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
CSNK1DP48730 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC14.21□□□□□ -0.13
CSNK1DP48730 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC14.21□□□□□ -0.13
CSNK1DP48730 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CSNK1DP48730 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC14.21□□□□□ -0.14
CSNK1DP48730 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC14.21□□□□□ -0.14
CSNK1DP48730 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.14
CSNK1DP48730 TBC1D27-202ENST00000424239 1573 ntBASIC14.21□□□□□ -0.14
CSNK1DP48730 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC14.21□□□□□ -0.14
CSNK1DP48730 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC14.21□□□□□ -0.14
CSNK1DP48730 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
CSNK1DP48730 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
CSNK1DP48730 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.14
CSNK1DP48730 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
CSNK1DP48730 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC14.21□□□□□ -0.14
CSNK1DP48730 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CSNK1DP48730 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
CSNK1DP48730 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
CSNK1DP48730 API5-208ENST00000531273 1868 ntTSL 2 BASIC14.21□□□□□ -0.14
CSNK1DP48730 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC14.21□□□□□ -0.14
CSNK1DP48730 AC006372.4-201ENST00000624122 1543 ntBASIC14.2□□□□□ -0.14
CSNK1DP48730 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CSNK1DP48730 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CSNK1DP48730 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CSNK1DP48730 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CSNK1DP48730 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC14.2□□□□□ -0.14
CSNK1DP48730 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CSNK1DP48730 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC14.2□□□□□ -0.14
CSNK1DP48730 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CSNK1DP48730 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC14.2□□□□□ -0.14
CSNK1DP48730 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC14.2□□□□□ -0.14
CSNK1DP48730 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC14.2□□□□□ -0.14
CSNK1DP48730 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CSNK1DP48730 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CSNK1DP48730 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CSNK1DP48730 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CSNK1DP48730 C19orf33-201ENST00000301246 467 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
CSNK1DP48730 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC14.2□□□□□ -0.14
CSNK1DP48730 GSTT2-201ENST00000402588 937 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CSNK1DP48730 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC14.2□□□□□ -0.14
CSNK1DP48730 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC14.2□□□□□ -0.14
CSNK1DP48730 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CSNK1DP48730 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CSNK1DP48730 AC093627.2-201ENST00000497017 568 ntTSL 4 BASIC14.2□□□□□ -0.14
CSNK1DP48730 ORAOV1P1-201ENST00000503108 395 ntBASIC14.2□□□□□ -0.14
CSNK1DP48730 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
CSNK1DP48730 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CSNK1DP48730 AC132825.4-202ENST00000578792 434 ntBASIC14.2□□□□□ -0.14
CSNK1DP48730 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
CSNK1DP48730 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC14.2□□□□□ -0.14
CSNK1DP48730 AC009145.4-201ENST00000625119 1294 ntBASIC14.2□□□□□ -0.14
CSNK1DP48730 AP001184.1-201ENST00000637936 376 ntBASIC14.2□□□□□ -0.14
CSNK1DP48730 TMEM211-203ENST00000640159 1122 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
CSNK1DP48730 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CSNK1DP48730 AC008620.2-201ENST00000510294 1569 ntBASIC14.2□□□□□ -0.14
CSNK1DP48730 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
CSNK1DP48730 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CSNK1DP48730 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms