Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 AL031283.1-201ENST00000427824 5178 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
PCP4P48539 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC9.18□□□□□ -0.94
PCP4P48539 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
PCP4P48539 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
PCP4P48539 C1orf116-202ENST00000461135 3142 ntTSL 2 BASIC9.18□□□□□ -0.94
PCP4P48539 HES2-205ENST00000487437 968 ntTSL 3 BASIC9.18□□□□□ -0.94
PCP4P48539 ACTR1A-205ENST00000487599 2726 ntTSL 5 BASIC9.18□□□□□ -0.94
PCP4P48539 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC9.18□□□□□ -0.94
PCP4P48539 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
PCP4P48539 ST5-207ENST00000526099 2404 ntTSL 2 BASIC9.18□□□□□ -0.94
PCP4P48539 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC9.18□□□□□ -0.94
PCP4P48539 DEPDC5-222ENST00000535622 5155 ntTSL 2 BASIC9.18□□□□□ -0.94
PCP4P48539 PAAF1-215ENST00000544909 1802 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
PCP4P48539 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC9.18□□□□□ -0.94
PCP4P48539 DUT-205ENST00000558813 769 ntTSL 2 BASIC9.18□□□□□ -0.94
PCP4P48539 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
PCP4P48539 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
PCP4P48539 OPN1MW3-201ENST00000599405 1998 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
PCP4P48539 LINC01278-204ENST00000609143 2768 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
PCP4P48539 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC9.18□□□□□ -0.94
PCP4P48539 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC9.18□□□□□ -0.94
PCP4P48539 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
PCP4P48539 AC040160.2-201ENST00000623816 1675 ntBASIC9.18□□□□□ -0.94
PCP4P48539 HADH-210ENST00000626637 1774 ntTSL 2 BASIC9.18□□□□□ -0.94
PCP4P48539 LINC02228-202ENST00000641261 2489 ntBASIC9.18□□□□□ -0.94
PCP4P48539 TLDC1-201ENST00000343629 5046 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
PCP4P48539 DIAPH3-205ENST00000400324 4804 ntAPPRIS P3 TSL 1 (best) BASIC9.18□□□□□ -0.94
PCP4P48539 CMTR2-202ENST00000434935 4104 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
PCP4P48539 FGFR1OP2-202ENST00000327214 2790 ntAPPRIS P1 TSL 2 BASIC9.18□□□□□ -0.94
PCP4P48539 AL157714.2-203ENST00000438275 2400 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
PCP4P48539 NFE2L1-202ENST00000361665 4729 ntTSL 5 BASIC9.17□□□□□ -0.94
PCP4P48539 ARMC8-223ENST00000538260 4728 ntTSL 2 BASIC9.17□□□□□ -0.94
PCP4P48539 PRIMPOL-201ENST00000314970 2289 ntAPPRIS P3 TSL 1 (best) BASIC9.17□□□□□ -0.94
PCP4P48539 EME1-207ENST00000511648 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
PCP4P48539 GOSR2-239ENST00000640608 3871 ntTSL 2 BASIC9.17□□□□□ -0.94
PCP4P48539 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
PCP4P48539 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
PCP4P48539 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC9.17□□□□□ -0.94
PCP4P48539 SNX33P1-201ENST00000592116 1762 ntBASIC9.17□□□□□ -0.94
PCP4P48539 AC011365.1-201ENST00000522615 3478 ntTSL 2 BASIC9.17□□□□□ -0.94
PCP4P48539 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC9.17□□□□□ -0.94
PCP4P48539 FCRLA-209ENST00000367957 1684 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
PCP4P48539 PAPD4-202ENST00000423041 3223 ntAPPRIS ALT1 TSL 1 (best) BASIC9.17□□□□□ -0.94
PCP4P48539 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
PCP4P48539 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
PCP4P48539 MCM3-201ENST00000229854 3083 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
PCP4P48539 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
PCP4P48539 NOL12-201ENST00000359114 2854 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
PCP4P48539 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
PCP4P48539 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
PCP4P48539 STPG1-203ENST00000374409 2804 ntAPPRIS ALT2 TSL 2 BASIC9.17□□□□□ -0.94
PCP4P48539 USP54-204ENST00000422491 2777 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
PCP4P48539 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC9.17□□□□□ -0.94
PCP4P48539 DLEC1-202ENST00000346219 5490 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
PCP4P48539 RBSN-201ENST00000253699 6678 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
PCP4P48539 ZNF8-201ENST00000621650 9128 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
PCP4P48539 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC9.17□□□□□ -0.94
PCP4P48539 DERL1-203ENST00000419562 918 ntTSL 2 BASIC9.17□□□□□ -0.94
PCP4P48539 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
PCP4P48539 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC9.17□□□□□ -0.94
PCP4P48539 SERP1-208ENST00000491660 830 ntTSL 2 BASIC9.17□□□□□ -0.94
PCP4P48539 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC9.17□□□□□ -0.94
PCP4P48539 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
PCP4P48539 FMNL3-201ENST00000335154 12634 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
PCP4P48539 GP2-204ENST00000381362 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
PCP4P48539 LSG1-201ENST00000265245 3572 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
PCP4P48539 COX15-201ENST00000016171 2356 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
PCP4P48539 LRRK2-202ENST00000343742 4740 ntTSL 5 BASIC9.17□□□□□ -0.94
PCP4P48539 RCAN1-205ENST00000443408 2315 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
PCP4P48539 CD22-201ENST00000085219 3268 ntAPPRIS P3 TSL 1 (best) BASIC9.17□□□□□ -0.94
PCP4P48539 PDCD11-201ENST00000369797 6453 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
PCP4P48539 DNAJC6-202ENST00000371069 5365 ntAPPRIS P4 TSL 1 (best) BASIC9.17□□□□□ -0.94
PCP4P48539 PLEKHM1P1-204ENST00000582201 3166 ntBASIC9.17□□□□□ -0.94
PCP4P48539 CPVL-201ENST00000265394 2091 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
PCP4P48539 BORA-206ENST00000613797 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
PCP4P48539 SPATA6-203ENST00000371847 4973 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
PCP4P48539 AL445309.1-201ENST00000607565 1989 ntBASIC9.17□□□□□ -0.94
PCP4P48539 CFAP69-201ENST00000389297 3902 ntAPPRIS P3 TSL 1 (best) BASIC9.17□□□□□ -0.94
PCP4P48539 TNXB-201ENST00000375244 13132 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
PCP4P48539 TRIM9-203ENST00000360392 3726 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
PCP4P48539 CARMN-209ENST00000602315 2706 ntTSL 5 BASIC9.17□□□□□ -0.94
PCP4P48539 SLC24A4-205ENST00000532405 9950 ntAPPRIS P3 TSL 1 (best) BASIC9.17□□□□□ -0.94
PCP4P48539 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC9.17□□□□□ -0.94
PCP4P48539 PKD1-201ENST00000262304 14138 ntAPPRIS P3 TSL 1 (best) BASIC9.17□□□□□ -0.94
PCP4P48539 LAMB4-203ENST00000418464 2600 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
PCP4P48539 RNF123-201ENST00000327697 4311 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
PCP4P48539 PBRM1-205ENST00000409057 4980 ntAPPRIS ALT1 TSL 1 (best) BASIC9.16□□□□□ -0.94
PCP4P48539 LYPD5-201ENST00000377950 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
PCP4P48539 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC9.16□□□□□ -0.94
PCP4P48539 KBTBD4-204ENST00000526005 2444 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.94
PCP4P48539 LRGUK-201ENST00000285928 3163 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
PCP4P48539 B4GALT4-201ENST00000359213 2385 ntAPPRIS P1 TSL 2 BASIC9.16□□□□□ -0.94
PCP4P48539 SERPINA3-201ENST00000393078 1589 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
PCP4P48539 SRP54-213ENST00000556994 2327 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.94
PCP4P48539 CD163L1-202ENST00000416109 4603 ntAPPRIS ALT2 TSL 2 BASIC9.16□□□□□ -0.94
PCP4P48539 SUN1-219ENST00000452783 3717 ntTSL 2 BASIC9.16□□□□□ -0.94
PCP4P48539 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
PCP4P48539 ATN1-202ENST00000396684 4290 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
PCP4P48539 TREML4-201ENST00000341495 2070 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
PCP4P48539 AL117258.1-201ENST00000637218 2656 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.94
Retrieved 100 of 98,524 protein–RNA pairs in 94.9 ms