RNA–Protein interactions for RNA: ENST00000343742.6

LRRK2-202, Transcript of leucine rich repeat kinase 2, humanhuman

TSL 5 BASIC

Gene LRRK2, Length 4,740 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2-202ENST00000343742 NISCHQ9Y2I1 1504 aa23.81■■□□□ 1.4
LRRK2-202ENST00000343742 DCAF8L2P0C7V8 631 aa22.8■■□□□ 1.24
LRRK2-202ENST00000343742 SHROOM4Q9ULL8 1493 aa21.97■■□□□ 1.11
LRRK2-202ENST00000343742 SUPT5HO00267 1087 aaKnown RBP21.82■■□□□ 1.08
LRRK2-202ENST00000343742 EHMT2Q96KQ7 1210 aa20.83■□□□□ 0.92
LRRK2-202ENST00000343742 FAM9AQ8IZU1 332 aaPredicted RBP20.46■□□□□ 0.87
LRRK2-202ENST00000343742 ABCC9O60706 1549 aa20.23■□□□□ 0.83
LRRK2-202ENST00000343742 TRIM41Q8WV44 630 aa20.1■□□□□ 0.81
LRRK2-202ENST00000343742 TTBK1Q5TCY1 1321 aaPredicted RBP19.99■□□□□ 0.79
LRRK2-202ENST00000343742 PCGF6Q9BYE7 350 aa19.99■□□□□ 0.79
LRRK2-202ENST00000343742 CHIC1Q5VXU3 224 aa19.96■□□□□ 0.79
LRRK2-202ENST00000343742 PABPN1Q86U42 306 aaKnown RBP eCLIP19.88■□□□□ 0.77
LRRK2-202ENST00000343742 LOC105371045A0A1W2PR82 267 aa19.87■□□□□ 0.77
LRRK2-202ENST00000343742 RANGAP1P46060 587 aaPredicted RBP19.87■□□□□ 0.77
LRRK2-202ENST00000343742 ZCCHC6Q5VYS8 1495 aaKnown RBP19.82■□□□□ 0.76
LRRK2-202ENST00000343742 PPARGC1BQ86YN6 1023 aaKnown RBP19.71■□□□□ 0.75
LRRK2-202ENST00000343742 CCDC180Q9P1Z9 1646 aa19.62■□□□□ 0.73
LRRK2-202ENST00000343742 UBTFP17480 764 aaKnown RBP19.6■□□□□ 0.73
LRRK2-202ENST00000343742 APLP2Q06481 763 aa19.53■□□□□ 0.72
LRRK2-202ENST00000343742 SCRIBQ14160 1630 aa19.51■□□□□ 0.71
LRRK2-202ENST00000343742 ATP1B4Q9UN42 357 aaPredicted RBP19.32■□□□□ 0.68
LRRK2-202ENST00000343742 CCER1Q8TC90 406 aaPredicted RBP19.2■□□□□ 0.66
LRRK2-202ENST00000343742 TRIM26Q12899 539 aaPredicted RBP19.17■□□□□ 0.66
LRRK2-202ENST00000343742 RSF1Q96T23 1441 aaPredicted RBP19.02■□□□□ 0.64
LRRK2-202ENST00000343742 HRCP23327 699 aa19.01■□□□□ 0.63
LRRK2-202ENST00000343742 MYO15BQ96JP2 1530 aa18.95■□□□□ 0.62
LRRK2-202ENST00000343742 ITGAEP38570 1179 aa18.94■□□□□ 0.62
LRRK2-202ENST00000343742 HNRNPUL2Q1KMD3 747 aaKnown RBP18.93■□□□□ 0.62
LRRK2-202ENST00000343742 CECR2Q9BXF3 1484 aa18.91■□□□□ 0.62
LRRK2-202ENST00000343742 RB1CC1Q8TDY2 1594 aa18.87■□□□□ 0.61
LRRK2-202ENST00000343742 ZEB1P37275 1124 aaPredicted RBP18.87■□□□□ 0.61
LRRK2-202ENST00000343742 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.86■□□□□ 0.61
LRRK2-202ENST00000343742 DCAF1Q9Y4B6 1507 aa18.86■□□□□ 0.61
LRRK2-202ENST00000343742 NACADO15069 1562 aa18.85■□□□□ 0.61
LRRK2-202ENST00000343742 CSRNP3Q8WYN3 585 aa18.79■□□□□ 0.6
LRRK2-202ENST00000343742 P3H3Q8IVL6 736 aa18.63■□□□□ 0.57
LRRK2-202ENST00000343742 MROH2BQ7Z745 1585 aa18.61■□□□□ 0.57
LRRK2-202ENST00000343742 YTHDC1Q96MU7 727 aaKnown RBP18.56■□□□□ 0.56
LRRK2-202ENST00000343742 ARID3CA6NKF2 412 aa18.48■□□□□ 0.55
LRRK2-202ENST00000343742 FAM50AQ14320 339 aaKnown RBP18.48■□□□□ 0.55
LRRK2-202ENST00000343742 FBLN2P98095 1184 aa18.47■□□□□ 0.55
LRRK2-202ENST00000343742 BAZ1AQ9NRL2 1556 aaPredicted RBP18.46■□□□□ 0.55
LRRK2-202ENST00000343742 BAZ1BQ9UIG0 1483 aaKnown RBP18.4■□□□□ 0.54
LRRK2-202ENST00000343742 WIZO95785 1651 aa18.37■□□□□ 0.53
LRRK2-202ENST00000343742 WRNQ14191 1432 aaPredicted RBP eCLIP18.33■□□□□ 0.53
LRRK2-202ENST00000343742 CCDC88BA6NC98 1476 aa18.32■□□□□ 0.52
LRRK2-202ENST00000343742 CENPBP07199 599 aaPredicted RBP18.31■□□□□ 0.52
LRRK2-202ENST00000343742 SOGA1O94964 1423 aa18.29■□□□□ 0.52
LRRK2-202ENST00000343742 ABCC8Q09428 1581 aa18.28■□□□□ 0.52
LRRK2-202ENST00000343742 NEUROD1Q13562 356 aa18.26■□□□□ 0.51
LRRK2-202ENST00000343742 DIEXFQ68CQ4 756 aaKnown RBP18.22■□□□□ 0.51
LRRK2-202ENST00000343742 CNGB1Q14028 1251 aaPredicted RBP18.21■□□□□ 0.51
LRRK2-202ENST00000343742 CEP162Q5TB80 1403 aa18.19■□□□□ 0.5
LRRK2-202ENST00000343742 MYT1LQ9UL68 1186 aa18.19■□□□□ 0.5
LRRK2-202ENST00000343742 CLIP1P30622 1438 aa18.16■□□□□ 0.5
LRRK2-202ENST00000343742 POLR3GLQ9BT43 218 aa18.15■□□□□ 0.5
LRRK2-202ENST00000343742 TRIM52Q96A61 297 aa18.14■□□□□ 0.49
LRRK2-202ENST00000343742 GOLGA3Q08378 1498 aa18.06■□□□□ 0.48
LRRK2-202ENST00000343742 TOP2AP11388 1531 aaKnown RBP18.03■□□□□ 0.48
LRRK2-202ENST00000343742 SMARCA4P51532 1647 aa18.03■□□□□ 0.48
LRRK2-202ENST00000343742 TNIKQ9UKE5 1360 aa18.03■□□□□ 0.48
LRRK2-202ENST00000343742 ATAD2BQ9ULI0 1458 aa18.02■□□□□ 0.48
LRRK2-202ENST00000343742 EEA1Q15075 1411 aa18.02■□□□□ 0.48
LRRK2-202ENST00000343742 ZNF777Q9ULD5 760 aaPredicted RBP18.01■□□□□ 0.47
LRRK2-202ENST00000343742 RUSC2Q8N2Y8 1516 aa17.98■□□□□ 0.47
LRRK2-202ENST00000343742 KIF27Q86VH2 1401 aa17.97■□□□□ 0.47
LRRK2-202ENST00000343742 CHIC2Q9UKJ5 165 aa17.95■□□□□ 0.46
LRRK2-202ENST00000343742 ZNF316A6NFI3 1004 aaPredicted RBP17.95■□□□□ 0.46
LRRK2-202ENST00000343742 CEP164Q9UPV0 1460 aa17.94■□□□□ 0.46
LRRK2-202ENST00000343742 SMARCA2P51531 1590 aa17.94■□□□□ 0.46
LRRK2-202ENST00000343742 PELP1Q8IZL8 1130 aaKnown RBP17.93■□□□□ 0.46
LRRK2-202ENST00000343742 ZNF326Q5BKZ1 582 aaKnown RBP17.92■□□□□ 0.46
LRRK2-202ENST00000343742 CUX2O14529 1486 aa17.89■□□□□ 0.45
LRRK2-202ENST00000343742 CHMP7Q8WUX9 453 aaPredicted RBP17.89■□□□□ 0.45
LRRK2-202ENST00000343742 CARMIL1Q5VZK9 1371 aa17.82■□□□□ 0.44
LRRK2-202ENST00000343742 MTUS2Q5JR59 1369 aa17.81■□□□□ 0.44
LRRK2-202ENST00000343742 KANK4Q5T7N3 995 aaPredicted RBP17.81■□□□□ 0.44
LRRK2-202ENST00000343742 TDRD9Q8NDG6 1382 aaKnown RBP17.8■□□□□ 0.44
LRRK2-202ENST00000343742 CADPSQ9ULU8 1353 aa17.77■□□□□ 0.43
LRRK2-202ENST00000343742 HIRIP3Q9BW71 556 aaPredicted RBP17.77■□□□□ 0.43
LRRK2-202ENST00000343742 CDK11AQ9UQ88 783 aaPredicted RBP17.77■□□□□ 0.43
LRRK2-202ENST00000343742 NEFLP07196 543 aa17.74■□□□□ 0.43
LRRK2-202ENST00000343742 RRP7BPQ9NSQ0 103 aa17.74■□□□□ 0.43
LRRK2-202ENST00000343742 RAPGEF2Q9Y4G8 1499 aa17.74■□□□□ 0.43
LRRK2-202ENST00000343742 GTF3C3Q9Y5Q9 886 aa17.69■□□□□ 0.42
LRRK2-202ENST00000343742 ERCC6Q03468 1493 aa17.67■□□□□ 0.42
LRRK2-202ENST00000343742 VPS8Q8N3P4 1428 aa17.65■□□□□ 0.42
LRRK2-202ENST00000343742 DDX10Q13206 875 aaKnown RBP17.64■□□□□ 0.41
LRRK2-202ENST00000343742 EIF4G1Q04637 1599 aaKnown RBP17.62■□□□□ 0.41
LRRK2-202ENST00000343742 KCNH8Q96L42 1107 aa17.61■□□□□ 0.41
LRRK2-202ENST00000343742 DNAJC5BQ9UF47 199 aa17.6■□□□□ 0.41
LRRK2-202ENST00000343742 TONSLQ96HA7 1378 aa17.6■□□□□ 0.41
LRRK2-202ENST00000343742 SIN3AQ96ST3 1273 aa17.6■□□□□ 0.41
LRRK2-202ENST00000343742 BICRAQ9NZM4 1560 aa17.6■□□□□ 0.41
LRRK2-202ENST00000343742 SLC4A1APQ9BWU0 796 aaKnown RBP17.59■□□□□ 0.41
LRRK2-202ENST00000343742 MIER1Q8N108 512 aa17.59■□□□□ 0.41
LRRK2-202ENST00000343742 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.58■□□□□ 0.41
LRRK2-202ENST00000343742 ANP32CO43423 234 aa17.58■□□□□ 0.4
LRRK2-202ENST00000343742 NCAPD3P42695 1498 aa17.57■□□□□ 0.4
LRRK2-202ENST00000343742 PDS5BQ9NTI5 1447 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms