Protein–RNA interactions for Protein: P48067

SLC6A9, Sodium- and chloride-dependent glycine transporter 1, humanhuman

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A9P48067 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
SLC6A9P48067 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SLC6A9P48067 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC12.75□□□□□ -0.37
SLC6A9P48067 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
SLC6A9P48067 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC12.75□□□□□ -0.37
SLC6A9P48067 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
SLC6A9P48067 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC12.75□□□□□ -0.37
SLC6A9P48067 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC12.75□□□□□ -0.37
SLC6A9P48067 AC027601.3-201ENST00000622907 509 ntBASIC12.75□□□□□ -0.37
SLC6A9P48067 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC12.75□□□□□ -0.37
SLC6A9P48067 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC12.75□□□□□ -0.37
SLC6A9P48067 PPT1-213ENST00000641319 2388 ntBASIC12.75□□□□□ -0.37
SLC6A9P48067 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
SLC6A9P48067 LAMA3-202ENST00000313654 10661 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
SLC6A9P48067 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SLC6A9P48067 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
SLC6A9P48067 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
SLC6A9P48067 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SLC6A9P48067 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
SLC6A9P48067 TCF23-201ENST00000296096 4882 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SLC6A9P48067 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
SLC6A9P48067 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
SLC6A9P48067 NLRC3-202ENST00000359128 6401 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SLC6A9P48067 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC12.74□□□□□ -0.37
SLC6A9P48067 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
SLC6A9P48067 TIAM1-201ENST00000286827 7200 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
SLC6A9P48067 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SLC6A9P48067 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
SLC6A9P48067 FBXO32-203ENST00000517956 6744 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SLC6A9P48067 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SLC6A9P48067 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
SLC6A9P48067 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC12.74□□□□□ -0.37
SLC6A9P48067 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC12.74□□□□□ -0.37
SLC6A9P48067 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SLC6A9P48067 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC12.74□□□□□ -0.37
SLC6A9P48067 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC12.74□□□□□ -0.37
SLC6A9P48067 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC12.74□□□□□ -0.37
SLC6A9P48067 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC12.74□□□□□ -0.37
SLC6A9P48067 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC12.74□□□□□ -0.37
SLC6A9P48067 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
SLC6A9P48067 AC006001.1-201ENST00000325130 474 ntBASIC12.74□□□□□ -0.37
SLC6A9P48067 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
SLC6A9P48067 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC12.74□□□□□ -0.37
SLC6A9P48067 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
SLC6A9P48067 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
SLC6A9P48067 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SLC6A9P48067 STX1A-203ENST00000395155 783 ntTSL 2 BASIC12.74□□□□□ -0.37
SLC6A9P48067 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
SLC6A9P48067 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
SLC6A9P48067 USB1-202ENST00000423271 1217 ntTSL 2 BASIC12.74□□□□□ -0.37
SLC6A9P48067 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC12.74□□□□□ -0.37
SLC6A9P48067 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
SLC6A9P48067 AC007274.1-201ENST00000439805 662 ntBASIC12.74□□□□□ -0.37
SLC6A9P48067 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
SLC6A9P48067 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
SLC6A9P48067 CICP12-201ENST00000455801 843 ntBASIC12.74□□□□□ -0.37
SLC6A9P48067 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC12.74□□□□□ -0.37
SLC6A9P48067 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC12.74□□□□□ -0.37
SLC6A9P48067 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC12.74□□□□□ -0.37
SLC6A9P48067 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC12.74□□□□□ -0.37
SLC6A9P48067 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC12.74□□□□□ -0.37
SLC6A9P48067 AC005586.2-201ENST00000563946 837 ntBASIC12.74□□□□□ -0.37
SLC6A9P48067 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC12.74□□□□□ -0.37
SLC6A9P48067 AL358472.3-201ENST00000608147 415 ntBASIC12.74□□□□□ -0.37
SLC6A9P48067 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC12.74□□□□□ -0.37
SLC6A9P48067 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SLC6A9P48067 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC12.74□□□□□ -0.37
SLC6A9P48067 AP2A2-202ENST00000448903 4575 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
SLC6A9P48067 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SLC6A9P48067 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SLC6A9P48067 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
SLC6A9P48067 RBP3-201ENST00000584701 4276 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SLC6A9P48067 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
SLC6A9P48067 ABR-202ENST00000302538 5289 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SLC6A9P48067 AC090114.2-201ENST00000608477 7054 ntBASIC12.74□□□□□ -0.37
SLC6A9P48067 NCLN-201ENST00000246117 4005 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SLC6A9P48067 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SLC6A9P48067 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
SLC6A9P48067 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SLC6A9P48067 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC12.74□□□□□ -0.37
SLC6A9P48067 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SLC6A9P48067 COL6A4P2-202ENST00000504443 2753 ntBASIC12.74□□□□□ -0.37
SLC6A9P48067 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SLC6A9P48067 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC12.74□□□□□ -0.37
SLC6A9P48067 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC12.73□□□□□ -0.37
SLC6A9P48067 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
SLC6A9P48067 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SLC6A9P48067 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
SLC6A9P48067 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
SLC6A9P48067 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
SLC6A9P48067 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
SLC6A9P48067 KCNMA1-210ENST00000404771 4014 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
SLC6A9P48067 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC12.73□□□□□ -0.37
SLC6A9P48067 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC12.73□□□□□ -0.37
SLC6A9P48067 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
SLC6A9P48067 AFDN-206ENST00000392112 7459 ntTSL 5 BASIC12.73□□□□□ -0.37
SLC6A9P48067 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC12.73□□□□□ -0.37
SLC6A9P48067 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC12.73□□□□□ -0.37
SLC6A9P48067 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC12.73□□□□□ -0.37
SLC6A9P48067 SLC4A1-201ENST00000262418 4965 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms