Protein–RNA interactions for Protein: P46098

HTR3A, 5-hydroxytryptamine receptor 3A, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR3AP46098 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HTR3AP46098 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
HTR3AP46098 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC13.28□□□□□ -0.28
HTR3AP46098 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
HTR3AP46098 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC13.28□□□□□ -0.28
HTR3AP46098 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC13.28□□□□□ -0.28
HTR3AP46098 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HTR3AP46098 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HTR3AP46098 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HTR3AP46098 HPD-204ENST00000543163 1709 ntTSL 5 BASIC13.28□□□□□ -0.28
HTR3AP46098 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC13.28□□□□□ -0.28
HTR3AP46098 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
HTR3AP46098 TP73-207ENST00000378290 1831 ntTSL 2 BASIC13.28□□□□□ -0.28
HTR3AP46098 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
HTR3AP46098 MGAT1-205ENST00000446023 3175 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
HTR3AP46098 ANKRD19P-201ENST00000338192 862 ntBASIC13.28□□□□□ -0.28
HTR3AP46098 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
HTR3AP46098 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
HTR3AP46098 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC13.28□□□□□ -0.28
HTR3AP46098 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC13.28□□□□□ -0.28
HTR3AP46098 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC13.28□□□□□ -0.28
HTR3AP46098 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
HTR3AP46098 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
HTR3AP46098 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
HTR3AP46098 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC13.28□□□□□ -0.28
HTR3AP46098 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC13.28□□□□□ -0.28
HTR3AP46098 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC13.28□□□□□ -0.28
HTR3AP46098 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC13.28□□□□□ -0.28
HTR3AP46098 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC13.28□□□□□ -0.28
HTR3AP46098 HNRNPA1P48-202ENST00000565308 961 ntBASIC13.28□□□□□ -0.28
HTR3AP46098 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
HTR3AP46098 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC13.28□□□□□ -0.28
HTR3AP46098 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HTR3AP46098 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC13.28□□□□□ -0.28
HTR3AP46098 CTBP1-AS-201ENST00000625256 3886 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
HTR3AP46098 AL121827.1-201ENST00000370257 3264 ntTSL 2 BASIC13.28□□□□□ -0.28
HTR3AP46098 AC064801.2-201ENST00000625052 1303 ntBASIC13.28□□□□□ -0.28
HTR3AP46098 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
HTR3AP46098 TGM1-201ENST00000206765 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HTR3AP46098 CD276-202ENST00000318443 3469 ntAPPRIS P2 TSL 2 BASIC13.28□□□□□ -0.28
HTR3AP46098 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HTR3AP46098 AMIGO3-201ENST00000320431 2862 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
HTR3AP46098 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC13.28□□□□□ -0.28
HTR3AP46098 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
HTR3AP46098 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
HTR3AP46098 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HTR3AP46098 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC13.28□□□□□ -0.28
HTR3AP46098 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
HTR3AP46098 TCAM1P-207ENST00000485295 1537 ntBASIC13.28□□□□□ -0.28
HTR3AP46098 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
HTR3AP46098 MAGED4B-201ENST00000335504 2578 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
HTR3AP46098 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
HTR3AP46098 ADK-205ENST00000539909 1866 ntTSL 2 BASIC13.27□□□□□ -0.28
HTR3AP46098 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
HTR3AP46098 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC13.27□□□□□ -0.28
HTR3AP46098 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
HTR3AP46098 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
HTR3AP46098 USP3-204ENST00000540797 5474 ntTSL 2 BASIC13.27□□□□□ -0.28
HTR3AP46098 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
HTR3AP46098 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.28
HTR3AP46098 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC13.27□□□□□ -0.28
HTR3AP46098 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.28
HTR3AP46098 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC13.27□□□□□ -0.29
HTR3AP46098 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
HTR3AP46098 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
HTR3AP46098 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
HTR3AP46098 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC13.27□□□□□ -0.29
HTR3AP46098 PGF-202ENST00000405431 666 ntTSL 5 BASIC13.27□□□□□ -0.29
HTR3AP46098 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC13.27□□□□□ -0.29
HTR3AP46098 AC099336.1-201ENST00000417053 1171 ntBASIC13.27□□□□□ -0.29
HTR3AP46098 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC13.27□□□□□ -0.29
HTR3AP46098 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC13.27□□□□□ -0.29
HTR3AP46098 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC13.27□□□□□ -0.29
HTR3AP46098 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.29
HTR3AP46098 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
HTR3AP46098 RNA5SP412-201ENST00000516234 123 ntBASIC13.27□□□□□ -0.29
HTR3AP46098 IGHVIII-5-2-201ENST00000522505 261 ntBASIC13.27□□□□□ -0.29
HTR3AP46098 IGHV3-71-201ENST00000523324 359 ntBASIC13.27□□□□□ -0.29
HTR3AP46098 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC13.27□□□□□ -0.29
HTR3AP46098 HILS1-202ENST00000545329 423 ntBASIC13.27□□□□□ -0.29
HTR3AP46098 SNX29P1-201ENST00000548357 1007 ntBASIC13.27□□□□□ -0.29
HTR3AP46098 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC13.27□□□□□ -0.29
HTR3AP46098 AC009884.2-201ENST00000603110 324 ntBASIC13.27□□□□□ -0.29
HTR3AP46098 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC13.27□□□□□ -0.29
HTR3AP46098 BIRC5-202ENST00000350051 2630 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
HTR3AP46098 GNPDA1-204ENST00000503794 2622 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
HTR3AP46098 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
HTR3AP46098 SRPRB-201ENST00000466490 2827 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
HTR3AP46098 NIN-202ENST00000324330 4364 ntTSL 5 BASIC13.27□□□□□ -0.29
HTR3AP46098 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
HTR3AP46098 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
HTR3AP46098 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
HTR3AP46098 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
HTR3AP46098 PCDHB18P-202ENST00000526308 3197 ntBASIC13.27□□□□□ -0.29
HTR3AP46098 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
HTR3AP46098 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
HTR3AP46098 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
HTR3AP46098 SNX12-202ENST00000374274 2376 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
HTR3AP46098 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC13.26□□□□□ -0.29
HTR3AP46098 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms