Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 AL512343.1-201ENST00000605837 169 ntBASIC14.96□□□□□ -0.01
SLC1A1P43005 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
SLC1A1P43005 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC14.96□□□□□ -0.01
SLC1A1P43005 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SLC1A1P43005 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC14.96□□□□□ -0.01
SLC1A1P43005 DKFZP434A062-201ENST00000573103 5021 ntBASIC14.96□□□□□ -0.01
SLC1A1P43005 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC14.96□□□□□ -0.02
SLC1A1P43005 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
SLC1A1P43005 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.02
SLC1A1P43005 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
SLC1A1P43005 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC14.96□□□□□ -0.02
SLC1A1P43005 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC14.96□□□□□ -0.02
SLC1A1P43005 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC14.96□□□□□ -0.02
SLC1A1P43005 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC14.96□□□□□ -0.02
SLC1A1P43005 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SLC1A1P43005 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SLC1A1P43005 RPL13AP3-202ENST00000494676 1473 ntBASIC14.95□□□□□ -0.02
SLC1A1P43005 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC14.95□□□□□ -0.02
SLC1A1P43005 PSAP-202ENST00000394936 2872 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
SLC1A1P43005 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
SLC1A1P43005 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SLC1A1P43005 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
SLC1A1P43005 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SLC1A1P43005 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
SLC1A1P43005 C16orf82-201ENST00000418886 2268 ntAPPRIS ALT2 BASIC14.95□□□□□ -0.02
SLC1A1P43005 CICP8-201ENST00000455800 2813 ntBASIC14.95□□□□□ -0.02
SLC1A1P43005 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC14.95□□□□□ -0.02
SLC1A1P43005 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SLC1A1P43005 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SLC1A1P43005 PGAP2-203ENST00000396986 1837 ntTSL 2 BASIC14.95□□□□□ -0.02
SLC1A1P43005 STK26-204ENST00000481105 1835 ntTSL 2 BASIC14.95□□□□□ -0.02
SLC1A1P43005 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SLC1A1P43005 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SLC1A1P43005 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC14.95□□□□□ -0.02
SLC1A1P43005 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SLC1A1P43005 AC092580.1-201ENST00000433998 658 ntBASIC14.95□□□□□ -0.02
SLC1A1P43005 OR2R1P-201ENST00000441404 914 ntBASIC14.95□□□□□ -0.02
SLC1A1P43005 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SLC1A1P43005 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC14.95□□□□□ -0.02
SLC1A1P43005 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC14.95□□□□□ -0.02
SLC1A1P43005 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC14.95□□□□□ -0.02
SLC1A1P43005 AC131212.3-201ENST00000624087 4219 ntBASIC14.95□□□□□ -0.02
SLC1A1P43005 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
SLC1A1P43005 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SLC1A1P43005 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SLC1A1P43005 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SLC1A1P43005 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SLC1A1P43005 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SLC1A1P43005 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC14.95□□□□□ -0.02
SLC1A1P43005 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SLC1A1P43005 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
SLC1A1P43005 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SLC1A1P43005 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
SLC1A1P43005 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
SLC1A1P43005 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SLC1A1P43005 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC14.95□□□□□ -0.02
SLC1A1P43005 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
SLC1A1P43005 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
SLC1A1P43005 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SLC1A1P43005 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SLC1A1P43005 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC14.95□□□□□ -0.02
SLC1A1P43005 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
SLC1A1P43005 AC107918.4-201ENST00000641966 3141 ntBASIC14.95□□□□□ -0.02
SLC1A1P43005 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SLC1A1P43005 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC14.94□□□□□ -0.02
SLC1A1P43005 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC14.94□□□□□ -0.02
SLC1A1P43005 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC14.94□□□□□ -0.02
SLC1A1P43005 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC14.94□□□□□ -0.02
SLC1A1P43005 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SLC1A1P43005 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SLC1A1P43005 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC14.94□□□□□ -0.02
SLC1A1P43005 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC14.94□□□□□ -0.02
SLC1A1P43005 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
SLC1A1P43005 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SLC1A1P43005 GALC-206ENST00000544807 2528 ntTSL 2 BASIC14.94□□□□□ -0.02
SLC1A1P43005 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SLC1A1P43005 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SLC1A1P43005 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC14.94□□□□□ -0.02
SLC1A1P43005 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SLC1A1P43005 JTB-202ENST00000356648 1040 ntTSL 2 BASIC14.94□□□□□ -0.02
SLC1A1P43005 CMC4-201ENST00000369479 864 ntAPPRIS P1 TSL 3 BASIC14.94□□□□□ -0.02
SLC1A1P43005 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
SLC1A1P43005 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC14.94□□□□□ -0.02
SLC1A1P43005 XBP1P1-201ENST00000436573 652 ntBASIC14.94□□□□□ -0.02
SLC1A1P43005 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC14.94□□□□□ -0.02
SLC1A1P43005 MCPH1-AS1-201ENST00000515608 2147 ntTSL 5 BASIC14.94□□□□□ -0.02
SLC1A1P43005 AC104989.1-201ENST00000519711 778 ntBASIC14.94□□□□□ -0.02
SLC1A1P43005 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
SLC1A1P43005 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
SLC1A1P43005 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC14.94□□□□□ -0.02
SLC1A1P43005 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC14.94□□□□□ -0.02
SLC1A1P43005 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC14.94□□□□□ -0.02
SLC1A1P43005 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SLC1A1P43005 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
SLC1A1P43005 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SLC1A1P43005 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
SLC1A1P43005 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC14.94□□□□□ -0.02
SLC1A1P43005 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SLC1A1P43005 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
SLC1A1P43005 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms