Protein–RNA interactions for Protein: P21709

EPHA1, Ephrin type-A receptor 1, humanhuman

Predictions only

Length 976 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA1P21709 HAL-202ENST00000538703 2637 ntTSL 2 BASIC12.41□□□□□ -0.42
EPHA1P21709 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
EPHA1P21709 ACTG1P17-201ENST00000558391 1119 ntBASIC12.41□□□□□ -0.42
EPHA1P21709 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC12.41□□□□□ -0.42
EPHA1P21709 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC12.41□□□□□ -0.42
EPHA1P21709 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC12.41□□□□□ -0.42
EPHA1P21709 MIR3908-201ENST00000579798 126 ntBASIC12.41□□□□□ -0.42
EPHA1P21709 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC12.41□□□□□ -0.42
EPHA1P21709 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC12.41□□□□□ -0.42
EPHA1P21709 AC106872.11-201ENST00000605838 421 ntBASIC12.41□□□□□ -0.42
EPHA1P21709 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
EPHA1P21709 DIO1-215ENST00000610607 796 ntTSL 5 BASIC12.41□□□□□ -0.42
EPHA1P21709 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC12.41□□□□□ -0.42
EPHA1P21709 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
EPHA1P21709 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
EPHA1P21709 RNF216-205ENST00000425013 5639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
EPHA1P21709 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
EPHA1P21709 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
EPHA1P21709 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
EPHA1P21709 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC12.41□□□□□ -0.42
EPHA1P21709 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
EPHA1P21709 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC12.41□□□□□ -0.42
EPHA1P21709 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
EPHA1P21709 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC12.41□□□□□ -0.42
EPHA1P21709 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
EPHA1P21709 SPOCK2-201ENST00000317376 5328 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
EPHA1P21709 EPRS-201ENST00000366923 5014 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
EPHA1P21709 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
EPHA1P21709 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
EPHA1P21709 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
EPHA1P21709 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
EPHA1P21709 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
EPHA1P21709 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
EPHA1P21709 TBKBP1-201ENST00000361722 4121 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
EPHA1P21709 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC12.4□□□□□ -0.42
EPHA1P21709 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
EPHA1P21709 GSE1-203ENST00000405402 4366 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
EPHA1P21709 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
EPHA1P21709 AL359881.3-201ENST00000602640 1721 ntBASIC12.4□□□□□ -0.42
EPHA1P21709 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
EPHA1P21709 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
EPHA1P21709 KCNJ9-201ENST00000368088 4170 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
EPHA1P21709 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
EPHA1P21709 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
EPHA1P21709 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
EPHA1P21709 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
EPHA1P21709 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
EPHA1P21709 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
EPHA1P21709 SNX21-203ENST00000372541 771 ntTSL 2 BASIC12.4□□□□□ -0.42
EPHA1P21709 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC12.4□□□□□ -0.42
EPHA1P21709 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
EPHA1P21709 AC079178.1-201ENST00000420915 656 ntBASIC12.4□□□□□ -0.42
EPHA1P21709 FNTAP2-201ENST00000430308 634 ntBASIC12.4□□□□□ -0.42
EPHA1P21709 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC12.4□□□□□ -0.42
EPHA1P21709 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC12.4□□□□□ -0.42
EPHA1P21709 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC12.4□□□□□ -0.42
EPHA1P21709 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC12.4□□□□□ -0.42
EPHA1P21709 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC12.4□□□□□ -0.42
EPHA1P21709 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
EPHA1P21709 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC12.4□□□□□ -0.42
EPHA1P21709 ENPP7P14-201ENST00000621765 1040 ntBASIC12.4□□□□□ -0.42
EPHA1P21709 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC12.4□□□□□ -0.42
EPHA1P21709 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC12.4□□□□□ -0.42
EPHA1P21709 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
EPHA1P21709 ABI2-202ENST00000261017 6484 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
EPHA1P21709 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
EPHA1P21709 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
EPHA1P21709 GRIN1-204ENST00000371553 3751 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.42
EPHA1P21709 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
EPHA1P21709 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
EPHA1P21709 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC12.4□□□□□ -0.42
EPHA1P21709 CSPG4P11-201ENST00000560634 4910 ntBASIC12.4□□□□□ -0.42
EPHA1P21709 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
EPHA1P21709 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
EPHA1P21709 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
EPHA1P21709 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
EPHA1P21709 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
EPHA1P21709 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC12.4□□□□□ -0.42
EPHA1P21709 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
EPHA1P21709 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
EPHA1P21709 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
EPHA1P21709 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.43
EPHA1P21709 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC12.4□□□□□ -0.43
EPHA1P21709 ATE1-208ENST00000540606 5165 ntTSL 2 BASIC12.4□□□□□ -0.43
EPHA1P21709 AP000347.1-201ENST00000417194 5004 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
EPHA1P21709 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC12.39□□□□□ -0.43
EPHA1P21709 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
EPHA1P21709 SLC46A1-207ENST00000612814 6376 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
EPHA1P21709 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
EPHA1P21709 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC12.39□□□□□ -0.43
EPHA1P21709 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
EPHA1P21709 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
EPHA1P21709 WIZ-202ENST00000389282 4067 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
EPHA1P21709 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
EPHA1P21709 COL6A3-202ENST00000347401 8625 ntTSL 5 BASIC12.39□□□□□ -0.43
EPHA1P21709 COL6A3-209ENST00000472056 8628 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
EPHA1P21709 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
EPHA1P21709 TXLNA-201ENST00000373609 5012 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
EPHA1P21709 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
EPHA1P21709 STXBP6-202ENST00000396700 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 74.8 ms