Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
RB1P06400 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RB1P06400 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
RB1P06400 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC14.94□□□□□ -0.02
RB1P06400 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC14.94□□□□□ -0.02
RB1P06400 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RB1P06400 PCDHA3-202ENST00000532566 4594 ntBASIC14.93□□□□□ -0.02
RB1P06400 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
RB1P06400 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
RB1P06400 AL590824.1-201ENST00000403828 1349 ntBASIC14.93□□□□□ -0.02
RB1P06400 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC14.93□□□□□ -0.02
RB1P06400 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
RB1P06400 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RB1P06400 FCRL6-202ENST00000339348 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
RB1P06400 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
RB1P06400 AC144831.1-201ENST00000573312 2656 ntBASIC14.93□□□□□ -0.02
RB1P06400 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC14.93□□□□□ -0.02
RB1P06400 DSG1-202ENST00000462981 1857 ntTSL 2 BASIC14.93□□□□□ -0.02
RB1P06400 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
RB1P06400 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC14.93□□□□□ -0.02
RB1P06400 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RB1P06400 MSRA-201ENST00000317173 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RB1P06400 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
RB1P06400 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RB1P06400 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
RB1P06400 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
RB1P06400 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RB1P06400 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC14.93□□□□□ -0.02
RB1P06400 POLR2G-201ENST00000301788 827 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RB1P06400 SIRPB3P-201ENST00000340424 1216 ntBASIC14.93□□□□□ -0.02
RB1P06400 TCEA3-201ENST00000374601 1197 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
RB1P06400 AL161733.1-201ENST00000421067 462 ntTSL 3 BASIC14.93□□□□□ -0.02
RB1P06400 AC104961.1-201ENST00000427605 771 ntBASIC14.93□□□□□ -0.02
RB1P06400 HNRNPA1P2-207ENST00000432375 960 ntBASIC14.93□□□□□ -0.02
RB1P06400 AL022332.1-202ENST00000432495 426 ntTSL 3 BASIC14.93□□□□□ -0.02
RB1P06400 AL132657.1-201ENST00000432530 712 ntTSL 3 BASIC14.93□□□□□ -0.02
RB1P06400 SEPHS2P1-201ENST00000511618 1162 ntBASIC14.93□□□□□ -0.02
RB1P06400 IGHEP2-201ENST00000519308 1256 ntBASIC14.93□□□□□ -0.02
RB1P06400 C10orf113-201ENST00000529198 614 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
RB1P06400 HNRNPA1P16-201ENST00000575692 955 ntBASIC14.93□□□□□ -0.02
RB1P06400 KRT17P4-206ENST00000584151 719 ntTSL 4 BASIC14.93□□□□□ -0.02
RB1P06400 OR2T11-201ENST00000625105 1072 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
RB1P06400 RARS-210ENST00000626454 177 ntTSL 5 BASIC14.93□□□□□ -0.02
RB1P06400 PCK2-208ENST00000559250 1804 ntTSL 5 BASIC14.93□□□□□ -0.02
RB1P06400 B3GNTL1-201ENST00000320865 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RB1P06400 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC14.93□□□□□ -0.02
RB1P06400 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RB1P06400 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
RB1P06400 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
RB1P06400 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
RB1P06400 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
RB1P06400 MAGEH1-201ENST00000342972 1462 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
RB1P06400 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC14.93□□□□□ -0.02
RB1P06400 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC14.93□□□□□ -0.02
RB1P06400 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RB1P06400 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
RB1P06400 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RB1P06400 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
RB1P06400 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RB1P06400 PGD-201ENST00000270776 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RB1P06400 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
RB1P06400 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RB1P06400 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC14.93□□□□□ -0.02
RB1P06400 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RB1P06400 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RB1P06400 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RB1P06400 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RB1P06400 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
RB1P06400 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RB1P06400 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RB1P06400 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RB1P06400 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RB1P06400 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
RB1P06400 ZNF691-201ENST00000372502 1910 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
RB1P06400 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RB1P06400 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RB1P06400 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC14.92□□□□□ -0.02
RB1P06400 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RB1P06400 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
RB1P06400 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RB1P06400 C11orf53-201ENST00000280325 1208 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
RB1P06400 CLCC1-202ENST00000348264 1124 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RB1P06400 COA6-203ENST00000366615 710 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RB1P06400 DKKL1P1-201ENST00000400550 698 ntBASIC14.92□□□□□ -0.02
RB1P06400 HMGA1P1-201ENST00000415560 1062 ntBASIC14.92□□□□□ -0.02
RB1P06400 BUD23-204ENST00000423497 1219 ntTSL 5 BASIC14.92□□□□□ -0.02
RB1P06400 MOCS1-207ENST00000432280 1071 ntTSL 5 BASIC14.92□□□□□ -0.02
RB1P06400 AL137026.2-201ENST00000437014 841 ntTSL 2 BASIC14.92□□□□□ -0.02
RB1P06400 AC117945.1-201ENST00000451375 463 ntTSL 3 BASIC14.92□□□□□ -0.02
RB1P06400 AC025171.3-201ENST00000509036 472 ntTSL 2 BASIC14.92□□□□□ -0.02
RB1P06400 AC108471.2-201ENST00000533736 1061 ntTSL 3 BASIC14.92□□□□□ -0.02
RB1P06400 RPAIN-205ENST00000536255 1057 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RB1P06400 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC14.92□□□□□ -0.02
RB1P06400 AC012617.1-201ENST00000586345 797 ntTSL 2 BASIC14.92□□□□□ -0.02
RB1P06400 AL049840.2-201ENST00000602722 535 ntBASIC14.92□□□□□ -0.02
RB1P06400 RNF103-CHMP3-202ENST00000604011 1135 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
RB1P06400 MIR6816-201ENST00000620368 66 ntBASIC14.92□□□□□ -0.02
RB1P06400 AC129778.1-201ENST00000623957 920 ntTSL 5 BASIC14.92□□□□□ -0.02
RB1P06400 HTR3D-201ENST00000334128 1459 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RB1P06400 CR382285.1-201ENST00000625012 1485 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms