Protein–RNA interactions for Protein: P04818

TYMS, Thymidylate synthase, humanhuman

Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TYMSP04818 ARHGEF1-203ENST00000354532 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
TYMSP04818 DPAGT1-217ENST00000639704 1719 ntTSL 5 BASIC11.06□□□□□ -0.64
TYMSP04818 PER1-202ENST00000354903 3115 ntTSL 2 BASIC11.06□□□□□ -0.64
TYMSP04818 SPTBN2-209ENST00000533211 8128 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
TYMSP04818 SKP2-209ENST00000620197 3255 ntTSL 2 BASIC11.06□□□□□ -0.64
TYMSP04818 HDAC8-207ENST00000373573 2014 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
TYMSP04818 AC073957.3-201ENST00000609998 6758 ntBASIC11.06□□□□□ -0.64
TYMSP04818 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
TYMSP04818 BTBD7P1-201ENST00000447253 1453 ntBASIC11.06□□□□□ -0.64
TYMSP04818 CDH8-201ENST00000299345 3728 ntTSL 5 BASIC11.06□□□□□ -0.64
TYMSP04818 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
TYMSP04818 AL358334.2-201ENST00000553648 4714 ntTSL 2 BASIC11.06□□□□□ -0.64
TYMSP04818 ANTXR2-203ENST00000403729 8273 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
TYMSP04818 NISCH-207ENST00000479054 5173 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
TYMSP04818 SLC28A1-201ENST00000286749 2636 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
TYMSP04818 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC11.05□□□□□ -0.64
TYMSP04818 KAT7-204ENST00000454930 1774 ntTSL 2 BASIC11.05□□□□□ -0.64
TYMSP04818 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
TYMSP04818 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
TYMSP04818 CSF3R-201ENST00000331941 2375 ntTSL 5 BASIC11.05□□□□□ -0.64
TYMSP04818 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC11.05□□□□□ -0.64
TYMSP04818 NCOA7-203ENST00000392477 6457 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
TYMSP04818 AC007666.1-201ENST00000443935 1838 ntTSL 5 BASIC11.05□□□□□ -0.64
TYMSP04818 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
TYMSP04818 PLAT-203ENST00000429089 2599 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
TYMSP04818 FAM122B-201ENST00000298090 2706 ntAPPRIS ALT2 TSL 2 BASIC11.05□□□□□ -0.64
TYMSP04818 NLGN3-206ENST00000612180 3319 ntTSL 5 BASIC11.05□□□□□ -0.64
TYMSP04818 TRPM5-201ENST00000155858 3929 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
TYMSP04818 WDFY1-201ENST00000233055 4660 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
TYMSP04818 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
TYMSP04818 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
TYMSP04818 ZDHHC11-201ENST00000283441 2604 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
TYMSP04818 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
TYMSP04818 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
TYMSP04818 DCAF12L1-201ENST00000371126 3382 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
TYMSP04818 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
TYMSP04818 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC11.05□□□□□ -0.64
TYMSP04818 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
TYMSP04818 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC11.05□□□□□ -0.64
TYMSP04818 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC11.05□□□□□ -0.64
TYMSP04818 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC11.05□□□□□ -0.64
TYMSP04818 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC11.05□□□□□ -0.64
TYMSP04818 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC11.05□□□□□ -0.64
TYMSP04818 AC241585.1-201ENST00000433527 519 ntBASIC11.05□□□□□ -0.64
TYMSP04818 MUC20-203ENST00000436408 2463 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
TYMSP04818 AC009477.1-201ENST00000452936 217 ntBASIC11.05□□□□□ -0.64
TYMSP04818 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC11.05□□□□□ -0.64
TYMSP04818 AL589987.1-201ENST00000453380 819 ntBASIC11.05□□□□□ -0.64
TYMSP04818 DRD5P1-201ENST00000456605 1438 ntBASIC11.05□□□□□ -0.64
TYMSP04818 SPDYE18-201ENST00000510091 1050 ntBASIC11.05□□□□□ -0.64
TYMSP04818 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC11.05□□□□□ -0.64
TYMSP04818 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC11.05□□□□□ -0.64
TYMSP04818 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC11.05□□□□□ -0.64
TYMSP04818 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC11.05□□□□□ -0.64
TYMSP04818 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC11.05□□□□□ -0.64
TYMSP04818 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC11.05□□□□□ -0.64
TYMSP04818 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC11.05□□□□□ -0.64
TYMSP04818 AL049840.4-201ENST00000602422 811 ntBASIC11.05□□□□□ -0.64
TYMSP04818 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
TYMSP04818 AC073862.5-201ENST00000624129 2027 ntBASIC11.05□□□□□ -0.64
TYMSP04818 YTHDF3-209ENST00000617200 5076 ntTSL 5 BASIC11.05□□□□□ -0.64
TYMSP04818 NSD2-206ENST00000382895 7827 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
TYMSP04818 SEMA6D-208ENST00000558014 6028 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
TYMSP04818 MADD-203ENST00000349238 5873 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
TYMSP04818 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
TYMSP04818 DNMT3B-205ENST00000443239 2674 ntTSL 2 BASIC11.05□□□□□ -0.64
TYMSP04818 SLC5A11-203ENST00000449109 2069 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
TYMSP04818 TMPRSS4-213ENST00000522824 2052 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
TYMSP04818 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
TYMSP04818 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
TYMSP04818 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC11.05□□□□□ -0.64
TYMSP04818 HINT3-201ENST00000229633 3314 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
TYMSP04818 LEPROTL1-201ENST00000321250 3173 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
TYMSP04818 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
TYMSP04818 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC11.05□□□□□ -0.64
TYMSP04818 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC11.05□□□□□ -0.64
TYMSP04818 PPCDC-201ENST00000342932 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
TYMSP04818 ST3GAL2-202ENST00000393640 8872 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
TYMSP04818 GFRA2-202ENST00000517328 2104 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
TYMSP04818 DLGAP1-AS1-201ENST00000317114 1966 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
TYMSP04818 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC11.05□□□□□ -0.64
TYMSP04818 APLP2-201ENST00000263574 3727 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
TYMSP04818 AC004147.4-201ENST00000636421 1844 ntTSL 5 BASIC11.05□□□□□ -0.64
TYMSP04818 C1orf167-202ENST00000433342 4545 ntAPPRIS P5 TSL 5 BASIC11.05□□□□□ -0.64
TYMSP04818 AC022400.8-201ENST00000623453 3599 ntBASIC11.05□□□□□ -0.64
TYMSP04818 RERE-201ENST00000337907 8026 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
TYMSP04818 MKNK1-201ENST00000341183 2612 ntTSL 5 BASIC11.05□□□□□ -0.64
TYMSP04818 SLC26A6-207ENST00000420764 2630 ntAPPRIS ALT1 TSL 1 (best) BASIC11.05□□□□□ -0.64
TYMSP04818 AL138799.1-201ENST00000448213 1675 ntBASIC11.04□□□□□ -0.64
TYMSP04818 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
TYMSP04818 TRAF3-208ENST00000560371 7640 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
TYMSP04818 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
TYMSP04818 SOGA1-201ENST00000237536 14371 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
TYMSP04818 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
TYMSP04818 ZNF124-202ENST00000472531 2243 ntTSL 2 BASIC11.04□□□□□ -0.64
TYMSP04818 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC11.04□□□□□ -0.64
TYMSP04818 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC11.04□□□□□ -0.64
TYMSP04818 CACNA1G-209ENST00000502264 6921 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
TYMSP04818 CACNA1G-221ENST00000510115 6912 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
TYMSP04818 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC11.04□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms