Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC13.05□□□□□ -0.32
P04436 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
P04436 HSPA8P5-201ENST00000456928 2069 ntBASIC13.05□□□□□ -0.32
P04436 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
P04436 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
P04436 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
P04436 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
P04436 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
P04436 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC13.05□□□□□ -0.32
P04436 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
P04436 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
P04436 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
P04436 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
P04436 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
P04436 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
P04436 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
P04436 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
P04436 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC13.05□□□□□ -0.32
P04436 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC13.05□□□□□ -0.32
P04436 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC13.05□□□□□ -0.32
P04436 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC13.05□□□□□ -0.32
P04436 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC13.05□□□□□ -0.32
P04436 MAX-218ENST00000557746 571 ntTSL 4 BASIC13.05□□□□□ -0.32
P04436 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC13.05□□□□□ -0.32
P04436 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC13.05□□□□□ -0.32
P04436 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC13.05□□□□□ -0.32
P04436 SIGLEC18P-201ENST00000602271 909 ntBASIC13.05□□□□□ -0.32
P04436 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC13.05□□□□□ -0.32
P04436 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC13.05□□□□□ -0.32
P04436 AC103691.2-201ENST00000618824 433 ntBASIC13.05□□□□□ -0.32
P04436 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
P04436 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
P04436 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
P04436 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
P04436 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
P04436 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
P04436 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC13.05□□□□□ -0.32
P04436 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC13.05□□□□□ -0.32
P04436 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
P04436 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
P04436 NISCH-207ENST00000479054 5173 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
P04436 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
P04436 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
P04436 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
P04436 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
P04436 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
P04436 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
P04436 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
P04436 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC13.04□□□□□ -0.32
P04436 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
P04436 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC13.04□□□□□ -0.32
P04436 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
P04436 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
P04436 IKZF1-202ENST00000343574 5925 ntTSL 5 BASIC13.04□□□□□ -0.32
P04436 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
P04436 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC13.04□□□□□ -0.32
P04436 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
P04436 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC13.04□□□□□ -0.32
P04436 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
P04436 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
P04436 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
P04436 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
P04436 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
P04436 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
P04436 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
P04436 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
P04436 MIR557-201ENST00000385239 98 ntBASIC13.04□□□□□ -0.32
P04436 BAX-205ENST00000391871 687 ntTSL 5 BASIC13.04□□□□□ -0.32
P04436 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
P04436 HINT2P1-201ENST00000419438 481 ntBASIC13.04□□□□□ -0.32
P04436 OR8T1P-201ENST00000421347 918 ntBASIC13.04□□□□□ -0.32
P04436 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
P04436 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC13.04□□□□□ -0.32
P04436 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
P04436 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC13.04□□□□□ -0.32
P04436 NEU3-205ENST00000531619 582 ntTSL 5 BASIC13.04□□□□□ -0.32
P04436 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC13.04□□□□□ -0.32
P04436 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC13.04□□□□□ -0.32
P04436 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC13.04□□□□□ -0.32
P04436 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC13.04□□□□□ -0.32
P04436 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC13.04□□□□□ -0.32
P04436 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC13.04□□□□□ -0.32
P04436 AL022313.4-201ENST00000562756 2046 ntBASIC13.04□□□□□ -0.32
P04436 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC13.04□□□□□ -0.32
P04436 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
P04436 RET-205ENST00000615310 4337 ntTSL 5 BASIC13.04□□□□□ -0.32
P04436 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
P04436 LINC00115-201ENST00000473798 1317 ntBASIC13.04□□□□□ -0.32
P04436 TUBB8P4-201ENST00000511806 1324 ntBASIC13.04□□□□□ -0.32
P04436 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC13.04□□□□□ -0.32
P04436 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC13.04□□□□□ -0.32
P04436 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
P04436 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
P04436 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
P04436 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC13.04□□□□□ -0.32
P04436 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
P04436 LINC01815-202ENST00000641468 1409 ntBASIC13.04□□□□□ -0.32
P04436 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC13.04□□□□□ -0.32
P04436 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
P04436 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms