Protein–RNA interactions for Protein: P04234

CD3D, T-cell surface glycoprotein CD3 delta chain, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD3DP04234 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
CD3DP04234 PAAF1-201ENST00000310571 4994 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CD3DP04234 POLG-202ENST00000442287 4487 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CD3DP04234 SNED1-205ENST00000405547 7986 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
CD3DP04234 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CD3DP04234 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC12.16□□□□□ -0.46
CD3DP04234 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC12.16□□□□□ -0.46
CD3DP04234 MESTP3-201ENST00000503460 968 ntBASIC12.16□□□□□ -0.46
CD3DP04234 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC12.16□□□□□ -0.46
CD3DP04234 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC12.16□□□□□ -0.46
CD3DP04234 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC12.16□□□□□ -0.46
CD3DP04234 MIR3687-2-201ENST00000577708 61 ntBASIC12.16□□□□□ -0.46
CD3DP04234 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC12.16□□□□□ -0.46
CD3DP04234 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
CD3DP04234 MIR3687-1-201ENST00000614492 61 ntBASIC12.16□□□□□ -0.46
CD3DP04234 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
CD3DP04234 CR392039.2-201ENST00000623182 509 ntBASIC12.16□□□□□ -0.46
CD3DP04234 AC107375.1-201ENST00000564464 2231 ntBASIC12.16□□□□□ -0.46
CD3DP04234 FUT3-207ENST00000589620 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CD3DP04234 CATSPERE-203ENST00000366534 3333 ntAPPRIS ALT2 TSL 2 BASIC12.16□□□□□ -0.46
CD3DP04234 DHX37-201ENST00000308736 4550 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
CD3DP04234 ATXN2L-225ENST00000570200 3635 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
CD3DP04234 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC12.16□□□□□ -0.46
CD3DP04234 AC108024.1-201ENST00000626286 1721 ntBASIC12.16□□□□□ -0.46
CD3DP04234 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CD3DP04234 ABCA17P-202ENST00000469908 4188 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
CD3DP04234 BCL2L1-201ENST00000307677 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CD3DP04234 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CD3DP04234 SPATA12-201ENST00000334325 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CD3DP04234 IFT88-202ENST00000351808 2856 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CD3DP04234 COG5-201ENST00000297135 4060 ntAPPRIS P4 TSL 1 (best) BASIC12.16□□□□□ -0.46
CD3DP04234 COL1A2-213ENST00000620463 4523 ntTSL 5 BASIC12.16□□□□□ -0.46
CD3DP04234 SEMA6D-208ENST00000558014 6028 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
CD3DP04234 TRPM4-202ENST00000427978 3444 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
CD3DP04234 PGGHG-204ENST00000409655 2963 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
CD3DP04234 TEX26-AS1-205ENST00000585870 2053 ntTSL 2 BASIC12.15□□□□□ -0.46
CD3DP04234 ZNF774-201ENST00000354377 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CD3DP04234 PIAS2-201ENST00000324794 4543 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
CD3DP04234 PGM1-202ENST00000371084 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CD3DP04234 DLGAP1-202ENST00000400145 2188 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
CD3DP04234 AC073862.5-201ENST00000624129 2027 ntBASIC12.15□□□□□ -0.46
CD3DP04234 TRGV9-201ENST00000444775 1735 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
CD3DP04234 TMC5-204ENST00000541464 3581 ntTSL 2 BASIC12.15□□□□□ -0.46
CD3DP04234 AC022400.8-201ENST00000623453 3599 ntBASIC12.15□□□□□ -0.46
CD3DP04234 SAMD14-202ENST00000330175 4425 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CD3DP04234 AC009093.10-201ENST00000641956 1442 ntBASIC12.15□□□□□ -0.46
CD3DP04234 NDRG4-236ENST00000566192 3265 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
CD3DP04234 TMEM164-203ENST00000372072 4975 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
CD3DP04234 CCNY-203ENST00000374704 3960 ntAPPRIS P4 TSL 1 (best) BASIC12.15□□□□□ -0.46
CD3DP04234 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC12.15□□□□□ -0.46
CD3DP04234 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CD3DP04234 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CD3DP04234 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CD3DP04234 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
CD3DP04234 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
CD3DP04234 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
CD3DP04234 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
CD3DP04234 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
CD3DP04234 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC12.15□□□□□ -0.46
CD3DP04234 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC12.15□□□□□ -0.46
CD3DP04234 AC107890.1-201ENST00000422478 521 ntBASIC12.15□□□□□ -0.46
CD3DP04234 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC12.15□□□□□ -0.46
CD3DP04234 AC097493.3-201ENST00000509725 367 ntBASIC12.15□□□□□ -0.46
CD3DP04234 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC12.15□□□□□ -0.46
CD3DP04234 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC12.15□□□□□ -0.46
CD3DP04234 TPRX2P-201ENST00000535362 881 ntBASIC12.15□□□□□ -0.46
CD3DP04234 AC023310.3-201ENST00000557027 670 ntBASIC12.15□□□□□ -0.46
CD3DP04234 AC100756.1-201ENST00000562736 682 ntBASIC12.15□□□□□ -0.46
CD3DP04234 AC138749.3-201ENST00000567691 622 ntBASIC12.15□□□□□ -0.46
CD3DP04234 PRR29-204ENST00000577953 565 ntTSL 4 BASIC12.15□□□□□ -0.46
CD3DP04234 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC12.15□□□□□ -0.46
CD3DP04234 AC027612.4-201ENST00000605371 583 ntBASIC12.15□□□□□ -0.46
CD3DP04234 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CD3DP04234 AC116165.1-201ENST00000611806 668 ntBASIC12.15□□□□□ -0.46
CD3DP04234 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
CD3DP04234 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC12.15□□□□□ -0.46
CD3DP04234 GPR107-208ENST00000610997 2813 ntTSL 5 BASIC12.15□□□□□ -0.46
CD3DP04234 RAB42-201ENST00000373826 1950 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
CD3DP04234 LDLRAD3-202ENST00000524419 1996 ntTSL 5 BASIC12.15□□□□□ -0.46
CD3DP04234 AC015819.3-201ENST00000624305 2674 ntBASIC12.15□□□□□ -0.46
CD3DP04234 BCRP2-203ENST00000461808 1832 ntTSL 2 BASIC12.15□□□□□ -0.46
CD3DP04234 TOE1-201ENST00000372090 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CD3DP04234 RABGEF1-210ENST00000437078 4319 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
CD3DP04234 TUBGCP5-208ENST00000620435 3342 ntTSL 2 BASIC12.15□□□□□ -0.46
CD3DP04234 LHCGR-201ENST00000294954 3044 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
CD3DP04234 AGPAT3-202ENST00000327505 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CD3DP04234 AGPAT3-204ENST00000398061 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CD3DP04234 DDX54-201ENST00000306014 4377 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
CD3DP04234 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
CD3DP04234 TMEM40-205ENST00000435575 1785 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.46
CD3DP04234 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
CD3DP04234 SMPDL3B-206ENST00000549094 1611 ntTSL 5 BASIC12.15□□□□□ -0.47
CD3DP04234 GMPR2-206ENST00000557854 2025 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
CD3DP04234 TRPC7-202ENST00000378459 2406 ntTSL 5 BASIC12.15□□□□□ -0.47
CD3DP04234 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
CD3DP04234 GOLGA8IP-201ENST00000340249 1899 ntTSL 2 BASIC12.14□□□□□ -0.47
CD3DP04234 TCTN2-202ENST00000426174 2513 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
CD3DP04234 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
CD3DP04234 KIF17-202ENST00000375044 3572 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
CD3DP04234 KIF1A-213ENST00000498729 9221 ntTSL 5 BASIC12.14□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 65.7 ms