Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC11.49□□□□□ -0.57
UPK2O00526 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
UPK2O00526 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
UPK2O00526 FAM58BP-201ENST00000439056 645 ntBASIC11.49□□□□□ -0.57
UPK2O00526 AC012441.2-201ENST00000444843 739 ntBASIC11.49□□□□□ -0.57
UPK2O00526 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC11.49□□□□□ -0.57
UPK2O00526 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC11.49□□□□□ -0.57
UPK2O00526 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC11.49□□□□□ -0.57
UPK2O00526 AC022217.1-201ENST00000521069 738 ntBASIC11.49□□□□□ -0.57
UPK2O00526 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC11.49□□□□□ -0.57
UPK2O00526 AC140658.4-201ENST00000561990 352 ntBASIC11.49□□□□□ -0.57
UPK2O00526 AC100827.2-201ENST00000563214 1194 ntBASIC11.49□□□□□ -0.57
UPK2O00526 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC11.49□□□□□ -0.57
UPK2O00526 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC11.49□□□□□ -0.57
UPK2O00526 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC11.49□□□□□ -0.57
UPK2O00526 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC11.49□□□□□ -0.57
UPK2O00526 Z98259.2-201ENST00000641583 609 ntBASIC11.49□□□□□ -0.57
UPK2O00526 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
UPK2O00526 AL590824.1-201ENST00000403828 1349 ntBASIC11.49□□□□□ -0.57
UPK2O00526 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC11.49□□□□□ -0.57
UPK2O00526 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
UPK2O00526 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC11.49□□□□□ -0.57
UPK2O00526 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC11.49□□□□□ -0.57
UPK2O00526 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
UPK2O00526 AC061965.1-201ENST00000560524 1465 ntBASIC11.49□□□□□ -0.57
UPK2O00526 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC11.49□□□□□ -0.57
UPK2O00526 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
UPK2O00526 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC11.49□□□□□ -0.57
UPK2O00526 ELAVL1-201ENST00000407627 6015 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
UPK2O00526 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
UPK2O00526 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
UPK2O00526 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
UPK2O00526 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC11.49□□□□□ -0.57
UPK2O00526 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
UPK2O00526 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC11.49□□□□□ -0.57
UPK2O00526 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC11.49□□□□□ -0.57
UPK2O00526 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
UPK2O00526 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
UPK2O00526 AC068760.1-201ENST00000493579 1953 ntBASIC11.48□□□□□ -0.57
UPK2O00526 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
UPK2O00526 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC11.48□□□□□ -0.57
UPK2O00526 TP73-211ENST00000604074 4806 ntTSL 5 BASIC11.48□□□□□ -0.57
UPK2O00526 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
UPK2O00526 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC11.48□□□□□ -0.57
UPK2O00526 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC11.48□□□□□ -0.57
UPK2O00526 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
UPK2O00526 KIAA1683-201ENST00000392413 4402 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
UPK2O00526 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
UPK2O00526 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
UPK2O00526 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC11.48□□□□□ -0.57
UPK2O00526 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
UPK2O00526 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
UPK2O00526 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
UPK2O00526 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC11.48□□□□□ -0.57
UPK2O00526 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
UPK2O00526 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
UPK2O00526 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC11.48□□□□□ -0.57
UPK2O00526 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC11.48□□□□□ -0.57
UPK2O00526 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC11.48□□□□□ -0.57
UPK2O00526 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
UPK2O00526 COX5BP8-201ENST00000416911 349 ntBASIC11.48□□□□□ -0.57
UPK2O00526 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC11.48□□□□□ -0.57
UPK2O00526 NME2P1-201ENST00000426182 414 ntBASIC11.48□□□□□ -0.57
UPK2O00526 HMGN1P19-201ENST00000436976 333 ntBASIC11.48□□□□□ -0.57
UPK2O00526 KLF2P1-201ENST00000447438 1042 ntBASIC11.48□□□□□ -0.57
UPK2O00526 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC11.48□□□□□ -0.57
UPK2O00526 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
UPK2O00526 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
UPK2O00526 HNRNPA1P36-201ENST00000521313 955 ntBASIC11.48□□□□□ -0.57
UPK2O00526 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC11.48□□□□□ -0.57
UPK2O00526 MIR4783-201ENST00000580343 82 ntBASIC11.48□□□□□ -0.57
UPK2O00526 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
UPK2O00526 PASK-201ENST00000234040 4572 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
UPK2O00526 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
UPK2O00526 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC11.48□□□□□ -0.57
UPK2O00526 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC11.48□□□□□ -0.57
UPK2O00526 AL591122.2-201ENST00000624125 1853 ntBASIC11.48□□□□□ -0.57
UPK2O00526 MED6-201ENST00000256379 1995 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
UPK2O00526 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC11.48□□□□□ -0.57
UPK2O00526 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC11.48□□□□□ -0.57
UPK2O00526 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
UPK2O00526 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
UPK2O00526 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
UPK2O00526 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
UPK2O00526 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC11.48□□□□□ -0.57
UPK2O00526 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
UPK2O00526 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
UPK2O00526 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
UPK2O00526 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
UPK2O00526 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
UPK2O00526 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
UPK2O00526 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
UPK2O00526 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
UPK2O00526 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC11.48□□□□□ -0.57
UPK2O00526 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
UPK2O00526 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
UPK2O00526 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
UPK2O00526 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
UPK2O00526 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
UPK2O00526 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms