Protein–RNA interactions for Protein: A0A1W2PRF3

Uncharacterized protein, humanhuman

Predictions only

Length 423 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
A0A1W2PRF3 SYT17-208ENST00000568433 812 ntTSL 3 BASIC11.85□□□□□ -0.51
A0A1W2PRF3 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC11.85□□□□□ -0.51
A0A1W2PRF3 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC11.85□□□□□ -0.51
A0A1W2PRF3 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
A0A1W2PRF3 SF3A1-201ENST00000215793 5143 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
A0A1W2PRF3 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC11.85□□□□□ -0.51
A0A1W2PRF3 RAP2B-201ENST00000323534 8351 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
A0A1W2PRF3 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
A0A1W2PRF3 TLL2-201ENST00000357947 6756 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
A0A1W2PRF3 PRMT7-201ENST00000339507 4238 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
A0A1W2PRF3 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
A0A1W2PRF3 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC11.85□□□□□ -0.51
A0A1W2PRF3 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
A0A1W2PRF3 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC11.85□□□□□ -0.51
A0A1W2PRF3 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
A0A1W2PRF3 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
A0A1W2PRF3 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC11.85□□□□□ -0.51
A0A1W2PRF3 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
A0A1W2PRF3 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC11.85□□□□□ -0.51
A0A1W2PRF3 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
A0A1W2PRF3 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
A0A1W2PRF3 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC11.85□□□□□ -0.51
A0A1W2PRF3 AC012617.1-204ENST00000586340 2305 ntBASIC11.85□□□□□ -0.51
A0A1W2PRF3 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
A0A1W2PRF3 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC11.84□□□□□ -0.51
A0A1W2PRF3 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
A0A1W2PRF3 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
A0A1W2PRF3 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
A0A1W2PRF3 LINC02486-201ENST00000604157 3000 ntBASIC11.84□□□□□ -0.51
A0A1W2PRF3 ANKRD30B-202ENST00000358984 4359 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
A0A1W2PRF3 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC11.84□□□□□ -0.51
A0A1W2PRF3 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC11.84□□□□□ -0.51
A0A1W2PRF3 ZMIZ2-206ENST00000441627 5089 ntAPPRIS P4 TSL 1 (best) BASIC11.84□□□□□ -0.51
A0A1W2PRF3 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC11.84□□□□□ -0.51
A0A1W2PRF3 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC11.84□□□□□ -0.51
A0A1W2PRF3 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
A0A1W2PRF3 GSN-209ENST00000449733 2702 ntTSL 2 BASIC11.84□□□□□ -0.51
A0A1W2PRF3 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
A0A1W2PRF3 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
A0A1W2PRF3 WDFY1-201ENST00000233055 4660 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
A0A1W2PRF3 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
A0A1W2PRF3 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
A0A1W2PRF3 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
A0A1W2PRF3 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
A0A1W2PRF3 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC11.84□□□□□ -0.51
A0A1W2PRF3 AC232323.1-201ENST00000540724 2099 ntBASIC11.84□□□□□ -0.51
A0A1W2PRF3 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
A0A1W2PRF3 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC11.84□□□□□ -0.51
A0A1W2PRF3 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
A0A1W2PRF3 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
A0A1W2PRF3 RN7SKP214-201ENST00000364208 315 ntBASIC11.84□□□□□ -0.51
A0A1W2PRF3 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
A0A1W2PRF3 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC11.84□□□□□ -0.51
A0A1W2PRF3 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC11.84□□□□□ -0.51
A0A1W2PRF3 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC11.84□□□□□ -0.51
A0A1W2PRF3 AC012618.1-201ENST00000461223 412 ntBASIC11.84□□□□□ -0.51
A0A1W2PRF3 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
A0A1W2PRF3 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC11.84□□□□□ -0.51
A0A1W2PRF3 MARK2P5-201ENST00000507649 634 ntBASIC11.84□□□□□ -0.51
A0A1W2PRF3 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC11.84□□□□□ -0.51
A0A1W2PRF3 AC009779.1-201ENST00000551138 283 ntBASIC11.84□□□□□ -0.51
A0A1W2PRF3 IGHV3OR16-16-201ENST00000563644 343 ntBASIC11.84□□□□□ -0.51
A0A1W2PRF3 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
A0A1W2PRF3 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC11.84□□□□□ -0.51
A0A1W2PRF3 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC11.84□□□□□ -0.51
A0A1W2PRF3 GOLGA7B-203ENST00000596005 6378 ntTSL 2 BASIC11.84□□□□□ -0.51
A0A1W2PRF3 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
A0A1W2PRF3 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC11.84□□□□□ -0.51
A0A1W2PRF3 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
A0A1W2PRF3 AP001505.2-201ENST00000616815 443 ntBASIC11.84□□□□□ -0.51
A0A1W2PRF3 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC11.84□□□□□ -0.51
A0A1W2PRF3 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC11.84□□□□□ -0.51
A0A1W2PRF3 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC11.84□□□□□ -0.51
A0A1W2PRF3 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
A0A1W2PRF3 ZNF654-204ENST00000636215 6446 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
A0A1W2PRF3 PFAS-201ENST00000314666 5371 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
A0A1W2PRF3 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
A0A1W2PRF3 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC11.84□□□□□ -0.51
A0A1W2PRF3 ABR-228ENST00000574437 3196 ntTSL 5 BASIC11.84□□□□□ -0.51
A0A1W2PRF3 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC11.84□□□□□ -0.51
A0A1W2PRF3 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
A0A1W2PRF3 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC11.84□□□□□ -0.51
A0A1W2PRF3 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
A0A1W2PRF3 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
A0A1W2PRF3 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
A0A1W2PRF3 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC11.84□□□□□ -0.51
A0A1W2PRF3 CACNA1G-229ENST00000514181 6795 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
A0A1W2PRF3 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
A0A1W2PRF3 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
A0A1W2PRF3 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
A0A1W2PRF3 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
A0A1W2PRF3 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
A0A1W2PRF3 LRRC8A-203ENST00000372600 4355 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
A0A1W2PRF3 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC11.83□□□□□ -0.51
A0A1W2PRF3 ADAMTSL4-201ENST00000271643 4250 ntAPPRIS P3 TSL 5 BASIC11.83□□□□□ -0.51
A0A1W2PRF3 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC11.83□□□□□ -0.52
A0A1W2PRF3 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC11.83□□□□□ -0.52
A0A1W2PRF3 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC11.83□□□□□ -0.52
A0A1W2PRF3 C9orf47-203ENST00000375851 4837 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
A0A1W2PRF3 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC11.83□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 142.8 ms