Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC10.86□□□□□ -0.67
HLA-DRB4X5D2U9 COX11-210ENST00000639671 696 ntBASIC10.86□□□□□ -0.67
HLA-DRB4X5D2U9 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC10.86□□□□□ -0.67
HLA-DRB4X5D2U9 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC10.86□□□□□ -0.67
HLA-DRB4X5D2U9 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
HLA-DRB4X5D2U9 PPFIA4-204ENST00000447715 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
HLA-DRB4X5D2U9 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
HLA-DRB4X5D2U9 EDEM3-202ENST00000367512 6678 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
HLA-DRB4X5D2U9 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC10.86□□□□□ -0.67
HLA-DRB4X5D2U9 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC10.86□□□□□ -0.67
HLA-DRB4X5D2U9 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
HLA-DRB4X5D2U9 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
HLA-DRB4X5D2U9 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
HLA-DRB4X5D2U9 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
HLA-DRB4X5D2U9 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC10.86□□□□□ -0.67
HLA-DRB4X5D2U9 DRD2-201ENST00000346454 2433 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
HLA-DRB4X5D2U9 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
HLA-DRB4X5D2U9 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
HLA-DRB4X5D2U9 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
HLA-DRB4X5D2U9 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
HLA-DRB4X5D2U9 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC10.86□□□□□ -0.67
HLA-DRB4X5D2U9 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
HLA-DRB4X5D2U9 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
HLA-DRB4X5D2U9 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
HLA-DRB4X5D2U9 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
HLA-DRB4X5D2U9 GSN-209ENST00000449733 2702 ntTSL 2 BASIC10.86□□□□□ -0.67
HLA-DRB4X5D2U9 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC10.85□□□□□ -0.67
HLA-DRB4X5D2U9 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
HLA-DRB4X5D2U9 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC10.85□□□□□ -0.67
HLA-DRB4X5D2U9 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
HLA-DRB4X5D2U9 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
HLA-DRB4X5D2U9 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC10.85□□□□□ -0.67
HLA-DRB4X5D2U9 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC10.85□□□□□ -0.67
HLA-DRB4X5D2U9 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC10.85□□□□□ -0.67
HLA-DRB4X5D2U9 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC10.85□□□□□ -0.67
HLA-DRB4X5D2U9 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
HLA-DRB4X5D2U9 HARS-202ENST00000415192 1401 ntTSL 2 BASIC10.85□□□□□ -0.67
HLA-DRB4X5D2U9 FUT8-203ENST00000360689 5166 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
HLA-DRB4X5D2U9 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
HLA-DRB4X5D2U9 ADK-205ENST00000539909 1866 ntTSL 2 BASIC10.85□□□□□ -0.67
HLA-DRB4X5D2U9 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC10.85□□□□□ -0.67
HLA-DRB4X5D2U9 ADGRL1-201ENST00000340736 7853 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
HLA-DRB4X5D2U9 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
HLA-DRB4X5D2U9 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
HLA-DRB4X5D2U9 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC10.85□□□□□ -0.67
HLA-DRB4X5D2U9 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
HLA-DRB4X5D2U9 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
HLA-DRB4X5D2U9 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
HLA-DRB4X5D2U9 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
HLA-DRB4X5D2U9 AC092053.3-201ENST00000641308 4975 ntBASIC10.85□□□□□ -0.67
HLA-DRB4X5D2U9 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
HLA-DRB4X5D2U9 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
HLA-DRB4X5D2U9 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
HLA-DRB4X5D2U9 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC10.85□□□□□ -0.67
HLA-DRB4X5D2U9 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
HLA-DRB4X5D2U9 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC10.85□□□□□ -0.67
HLA-DRB4X5D2U9 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC10.85□□□□□ -0.67
HLA-DRB4X5D2U9 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC10.85□□□□□ -0.67
HLA-DRB4X5D2U9 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
HLA-DRB4X5D2U9 FAM21FP-201ENST00000426241 1131 ntBASIC10.85□□□□□ -0.67
HLA-DRB4X5D2U9 FAM58BP-201ENST00000439056 645 ntBASIC10.85□□□□□ -0.67
HLA-DRB4X5D2U9 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
HLA-DRB4X5D2U9 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
HLA-DRB4X5D2U9 IGHVIII-5-2-201ENST00000522505 261 ntBASIC10.85□□□□□ -0.67
HLA-DRB4X5D2U9 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC10.85□□□□□ -0.67
HLA-DRB4X5D2U9 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
HLA-DRB4X5D2U9 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC10.85□□□□□ -0.67
HLA-DRB4X5D2U9 AC005586.2-201ENST00000563946 837 ntBASIC10.85□□□□□ -0.67
HLA-DRB4X5D2U9 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC10.85□□□□□ -0.67
HLA-DRB4X5D2U9 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
HLA-DRB4X5D2U9 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC10.85□□□□□ -0.67
HLA-DRB4X5D2U9 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC10.85□□□□□ -0.67
HLA-DRB4X5D2U9 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
HLA-DRB4X5D2U9 TXNDC12-201ENST00000371626 2396 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
HLA-DRB4X5D2U9 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC10.85□□□□□ -0.67
HLA-DRB4X5D2U9 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC10.85□□□□□ -0.67
HLA-DRB4X5D2U9 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
HLA-DRB4X5D2U9 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC10.85□□□□□ -0.67
HLA-DRB4X5D2U9 AC007663.2-201ENST00000506039 2228 ntTSL 2 BASIC10.85□□□□□ -0.67
HLA-DRB4X5D2U9 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC10.85□□□□□ -0.67
HLA-DRB4X5D2U9 ZNF843-202ENST00000564218 3816 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
HLA-DRB4X5D2U9 BAIAP3-201ENST00000324385 4678 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
HLA-DRB4X5D2U9 AL359643.2-201ENST00000606227 3273 ntTSL 2 BASIC10.85□□□□□ -0.67
HLA-DRB4X5D2U9 DGKD-201ENST00000264057 6297 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
HLA-DRB4X5D2U9 THAP2-201ENST00000308086 5719 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
HLA-DRB4X5D2U9 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
HLA-DRB4X5D2U9 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
HLA-DRB4X5D2U9 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
HLA-DRB4X5D2U9 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
HLA-DRB4X5D2U9 PRRT2-201ENST00000300797 3002 ntTSL 2 BASIC10.84□□□□□ -0.67
HLA-DRB4X5D2U9 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
HLA-DRB4X5D2U9 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
HLA-DRB4X5D2U9 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
HLA-DRB4X5D2U9 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
HLA-DRB4X5D2U9 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
HLA-DRB4X5D2U9 IKZF1-202ENST00000343574 5925 ntTSL 5 BASIC10.84□□□□□ -0.67
HLA-DRB4X5D2U9 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
HLA-DRB4X5D2U9 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
HLA-DRB4X5D2U9 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
HLA-DRB4X5D2U9 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC10.84□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms