Protein–RNA interactions for Protein: Q9UBC3

DNMT3B, DNA (cytosine-5)-methyltransferase 3B, humanhuman

Known RBP Predictions only

Length 853 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3BQ9UBC3 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
DNMT3BQ9UBC3 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
DNMT3BQ9UBC3 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
DNMT3BQ9UBC3 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC14.79□□□□□ -0.04
DNMT3BQ9UBC3 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
DNMT3BQ9UBC3 AC156455.1-203ENST00000423999 893 ntTSL 2 BASIC14.79□□□□□ -0.04
DNMT3BQ9UBC3 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC14.79□□□□□ -0.04
DNMT3BQ9UBC3 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC14.79□□□□□ -0.04
DNMT3BQ9UBC3 AL020996.1-201ENST00000442055 435 ntTSL 2 BASIC14.79□□□□□ -0.04
DNMT3BQ9UBC3 TP53AIP1-201ENST00000458238 777 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
DNMT3BQ9UBC3 ODCP-201ENST00000459650 1639 ntBASIC14.79□□□□□ -0.04
DNMT3BQ9UBC3 RN7SL375P-201ENST00000492442 298 ntBASIC14.79□□□□□ -0.04
DNMT3BQ9UBC3 CHTF8-204ENST00000518041 567 ntTSL 2 BASIC14.79□□□□□ -0.04
DNMT3BQ9UBC3 AC091564.6-201ENST00000526633 487 ntTSL 3 BASIC14.79□□□□□ -0.04
DNMT3BQ9UBC3 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
DNMT3BQ9UBC3 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
DNMT3BQ9UBC3 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
DNMT3BQ9UBC3 MIR4265-201ENST00000582152 99 ntBASIC14.79□□□□□ -0.04
DNMT3BQ9UBC3 FXYD3-204ENST00000603181 758 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
DNMT3BQ9UBC3 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
DNMT3BQ9UBC3 AL137793.2-201ENST00000632635 659 ntTSL 3 BASIC14.79□□□□□ -0.04
DNMT3BQ9UBC3 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
DNMT3BQ9UBC3 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
DNMT3BQ9UBC3 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
DNMT3BQ9UBC3 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
DNMT3BQ9UBC3 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
DNMT3BQ9UBC3 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
DNMT3BQ9UBC3 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
DNMT3BQ9UBC3 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC14.79□□□□□ -0.04
DNMT3BQ9UBC3 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
DNMT3BQ9UBC3 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
DNMT3BQ9UBC3 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
DNMT3BQ9UBC3 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
DNMT3BQ9UBC3 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
DNMT3BQ9UBC3 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
DNMT3BQ9UBC3 RPL13AP3-202ENST00000494676 1473 ntBASIC14.78□□□□□ -0.04
DNMT3BQ9UBC3 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
DNMT3BQ9UBC3 UPK1A-203ENST00000616789 1366 ntTSL 5 BASIC14.78□□□□□ -0.04
DNMT3BQ9UBC3 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
DNMT3BQ9UBC3 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
DNMT3BQ9UBC3 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
DNMT3BQ9UBC3 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
DNMT3BQ9UBC3 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
DNMT3BQ9UBC3 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC14.78□□□□□ -0.04
DNMT3BQ9UBC3 VEGFA-201ENST00000230480 993 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
DNMT3BQ9UBC3 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC14.78□□□□□ -0.04
DNMT3BQ9UBC3 FAM92A-202ENST00000423990 914 ntTSL 5 BASIC14.78□□□□□ -0.04
DNMT3BQ9UBC3 FOXP4-AS1-202ENST00000432751 409 ntTSL 2 BASIC14.78□□□□□ -0.04
DNMT3BQ9UBC3 SLC25A15P3-201ENST00000505530 290 ntBASIC14.78□□□□□ -0.04
DNMT3BQ9UBC3 NUDCD2-202ENST00000517501 448 ntTSL 5 BASIC14.78□□□□□ -0.04
DNMT3BQ9UBC3 ZNF268-210ENST00000541211 781 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
DNMT3BQ9UBC3 C11orf97-201ENST00000542198 701 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
DNMT3BQ9UBC3 AP005131.2-201ENST00000589045 487 ntTSL 2 BASIC14.78□□□□□ -0.04
DNMT3BQ9UBC3 AC012073.1-201ENST00000606114 1108 ntBASIC14.78□□□□□ -0.04
DNMT3BQ9UBC3 AL359091.4-201ENST00000610052 409 ntBASIC14.78□□□□□ -0.04
DNMT3BQ9UBC3 MYOZ3-209ENST00000615557 1031 ntTSL 2 BASIC14.78□□□□□ -0.04
DNMT3BQ9UBC3 AC244250.3-201ENST00000620749 366 ntBASIC14.78□□□□□ -0.04
DNMT3BQ9UBC3 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC14.78□□□□□ -0.04
DNMT3BQ9UBC3 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
DNMT3BQ9UBC3 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
DNMT3BQ9UBC3 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
DNMT3BQ9UBC3 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC14.78□□□□□ -0.04
DNMT3BQ9UBC3 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC14.78□□□□□ -0.04
DNMT3BQ9UBC3 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
DNMT3BQ9UBC3 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
DNMT3BQ9UBC3 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC14.78□□□□□ -0.04
DNMT3BQ9UBC3 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
DNMT3BQ9UBC3 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
DNMT3BQ9UBC3 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
DNMT3BQ9UBC3 RN7SL832P-201ENST00000607781 1756 ntBASIC14.78□□□□□ -0.04
DNMT3BQ9UBC3 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
DNMT3BQ9UBC3 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.04
DNMT3BQ9UBC3 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
DNMT3BQ9UBC3 MRPL55-205ENST00000366731 1423 ntTSL 2 BASIC14.77□□□□□ -0.04
DNMT3BQ9UBC3 PKD1P5-201ENST00000532415 10291 ntBASIC14.77□□□□□ -0.04
DNMT3BQ9UBC3 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
DNMT3BQ9UBC3 NTF3-202ENST00000423158 1336 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.04
DNMT3BQ9UBC3 C12orf65-204ENST00000429587 1326 ntAPPRIS P2 TSL 2 BASIC14.77□□□□□ -0.04
DNMT3BQ9UBC3 PDXDC2P-206ENST00000534700 1315 ntBASIC14.77□□□□□ -0.04
DNMT3BQ9UBC3 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
DNMT3BQ9UBC3 SNRPC-201ENST00000244520 842 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
DNMT3BQ9UBC3 MED11-201ENST00000293777 833 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
DNMT3BQ9UBC3 OBSCN-AS1-201ENST00000295012 889 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
DNMT3BQ9UBC3 MBD3L3-201ENST00000333843 775 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
DNMT3BQ9UBC3 ZNRD1-203ENST00000376782 736 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
DNMT3BQ9UBC3 OR52M2P-201ENST00000414298 959 ntBASIC14.77□□□□□ -0.05
DNMT3BQ9UBC3 HIGD1A-203ENST00000430190 741 ntTSL 2 BASIC14.77□□□□□ -0.05
DNMT3BQ9UBC3 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC14.77□□□□□ -0.05
DNMT3BQ9UBC3 RAP1B-216ENST00000537460 1072 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
DNMT3BQ9UBC3 HIST2H2BF-204ENST00000545683 999 ntTSL 2 BASIC14.77□□□□□ -0.05
DNMT3BQ9UBC3 AC136944.4-201ENST00000568893 660 ntTSL 4 BASIC14.77□□□□□ -0.05
DNMT3BQ9UBC3 NT5C-204ENST00000578337 582 ntTSL 2 BASIC14.77□□□□□ -0.05
DNMT3BQ9UBC3 AC011444.1-201ENST00000587836 639 ntTSL 3 BASIC14.77□□□□□ -0.05
DNMT3BQ9UBC3 HPX-213ENST00000615166 826 ntTSL 5 BASIC14.77□□□□□ -0.05
DNMT3BQ9UBC3 TP53-221ENST00000615910 1149 ntTSL 5 BASIC14.77□□□□□ -0.05
DNMT3BQ9UBC3 C1orf232-202ENST00000635463 466 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
DNMT3BQ9UBC3 CSAG3-203ENST00000638835 793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
DNMT3BQ9UBC3 CSAG2-204ENST00000640702 793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
DNMT3BQ9UBC3 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
DNMT3BQ9UBC3 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 67.6 ms