Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CUEDC1Q9NWM3 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC13.91□□□□□ -0.18
CUEDC1Q9NWM3 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC13.91□□□□□ -0.18
CUEDC1Q9NWM3 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CUEDC1Q9NWM3 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC13.91□□□□□ -0.18
CUEDC1Q9NWM3 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
CUEDC1Q9NWM3 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
CUEDC1Q9NWM3 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CUEDC1Q9NWM3 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC13.91□□□□□ -0.18
CUEDC1Q9NWM3 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CUEDC1Q9NWM3 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC13.91□□□□□ -0.18
CUEDC1Q9NWM3 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
CUEDC1Q9NWM3 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC13.91□□□□□ -0.18
CUEDC1Q9NWM3 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC13.91□□□□□ -0.18
CUEDC1Q9NWM3 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC13.91□□□□□ -0.18
CUEDC1Q9NWM3 AC078875.1-201ENST00000431907 724 ntBASIC13.91□□□□□ -0.18
CUEDC1Q9NWM3 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC13.91□□□□□ -0.18
CUEDC1Q9NWM3 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC13.91□□□□□ -0.18
CUEDC1Q9NWM3 XBP1P1-201ENST00000436573 652 ntBASIC13.91□□□□□ -0.18
CUEDC1Q9NWM3 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC13.91□□□□□ -0.18
CUEDC1Q9NWM3 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC13.91□□□□□ -0.18
CUEDC1Q9NWM3 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC13.91□□□□□ -0.18
CUEDC1Q9NWM3 AC009779.1-201ENST00000551138 283 ntBASIC13.91□□□□□ -0.18
CUEDC1Q9NWM3 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC13.91□□□□□ -0.18
CUEDC1Q9NWM3 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC13.91□□□□□ -0.18
CUEDC1Q9NWM3 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
CUEDC1Q9NWM3 KLK3-207ENST00000595952 969 ntTSL 3 BASIC13.91□□□□□ -0.18
CUEDC1Q9NWM3 AC021016.3-201ENST00000608367 477 ntBASIC13.91□□□□□ -0.18
CUEDC1Q9NWM3 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC13.91□□□□□ -0.18
CUEDC1Q9NWM3 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CUEDC1Q9NWM3 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CUEDC1Q9NWM3 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CUEDC1Q9NWM3 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CUEDC1Q9NWM3 LAP3P2-201ENST00000454686 1454 ntBASIC13.91□□□□□ -0.18
CUEDC1Q9NWM3 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CUEDC1Q9NWM3 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC13.91□□□□□ -0.18
CUEDC1Q9NWM3 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
CUEDC1Q9NWM3 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
CUEDC1Q9NWM3 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
CUEDC1Q9NWM3 FUK-202ENST00000378912 3925 ntTSL 2 BASIC13.91□□□□□ -0.18
CUEDC1Q9NWM3 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CUEDC1Q9NWM3 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC13.91□□□□□ -0.18
CUEDC1Q9NWM3 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CUEDC1Q9NWM3 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CUEDC1Q9NWM3 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
CUEDC1Q9NWM3 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC13.91□□□□□ -0.18
CUEDC1Q9NWM3 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CUEDC1Q9NWM3 MST1P2-201ENST00000457982 2291 ntBASIC13.9□□□□□ -0.18
CUEDC1Q9NWM3 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CUEDC1Q9NWM3 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
CUEDC1Q9NWM3 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC13.9□□□□□ -0.18
CUEDC1Q9NWM3 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
CUEDC1Q9NWM3 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CUEDC1Q9NWM3 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
CUEDC1Q9NWM3 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CUEDC1Q9NWM3 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CUEDC1Q9NWM3 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
CUEDC1Q9NWM3 AC067750.1-201ENST00000608826 6545 ntBASIC13.9□□□□□ -0.18
CUEDC1Q9NWM3 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC13.9□□□□□ -0.18
CUEDC1Q9NWM3 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
CUEDC1Q9NWM3 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
CUEDC1Q9NWM3 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC13.9□□□□□ -0.18
CUEDC1Q9NWM3 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CUEDC1Q9NWM3 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CUEDC1Q9NWM3 MIR33B-201ENST00000385104 96 ntBASIC13.9□□□□□ -0.18
CUEDC1Q9NWM3 HLA-DQB2-229ENST00000411527 1059 ntBASIC13.9□□□□□ -0.18
CUEDC1Q9NWM3 RPL17P11-201ENST00000417593 544 ntBASIC13.9□□□□□ -0.18
CUEDC1Q9NWM3 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC13.9□□□□□ -0.18
CUEDC1Q9NWM3 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC13.9□□□□□ -0.18
CUEDC1Q9NWM3 AC092473.1-201ENST00000441098 221 ntBASIC13.9□□□□□ -0.18
CUEDC1Q9NWM3 MARK2P5-201ENST00000507649 634 ntBASIC13.9□□□□□ -0.18
CUEDC1Q9NWM3 AC022217.1-201ENST00000521069 738 ntBASIC13.9□□□□□ -0.18
CUEDC1Q9NWM3 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CUEDC1Q9NWM3 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC13.9□□□□□ -0.18
CUEDC1Q9NWM3 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC13.9□□□□□ -0.18
CUEDC1Q9NWM3 USP3-AS1-204ENST00000559861 620 ntTSL 5 BASIC13.9□□□□□ -0.18
CUEDC1Q9NWM3 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC13.9□□□□□ -0.18
CUEDC1Q9NWM3 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC13.9□□□□□ -0.18
CUEDC1Q9NWM3 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC13.9□□□□□ -0.18
CUEDC1Q9NWM3 AL136295.7-201ENST00000619226 1200 ntBASIC13.9□□□□□ -0.18
CUEDC1Q9NWM3 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC13.9□□□□□ -0.18
CUEDC1Q9NWM3 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CUEDC1Q9NWM3 OS9-204ENST00000389146 2091 ntTSL 2 BASIC13.9□□□□□ -0.18
CUEDC1Q9NWM3 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC13.9□□□□□ -0.18
CUEDC1Q9NWM3 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CUEDC1Q9NWM3 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
CUEDC1Q9NWM3 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CUEDC1Q9NWM3 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CUEDC1Q9NWM3 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CUEDC1Q9NWM3 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC13.9□□□□□ -0.18
CUEDC1Q9NWM3 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC13.9□□□□□ -0.18
CUEDC1Q9NWM3 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC13.9□□□□□ -0.18
CUEDC1Q9NWM3 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CUEDC1Q9NWM3 TUBB8P4-201ENST00000511806 1324 ntBASIC13.9□□□□□ -0.19
CUEDC1Q9NWM3 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CUEDC1Q9NWM3 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CUEDC1Q9NWM3 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CUEDC1Q9NWM3 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CUEDC1Q9NWM3 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CUEDC1Q9NWM3 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 57.9 ms