Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
KRTAP4-3Q9BYR4 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC4.85□□□□□ -1.63
KRTAP4-3Q9BYR4 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
KRTAP4-3Q9BYR4 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
KRTAP4-3Q9BYR4 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
KRTAP4-3Q9BYR4 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
KRTAP4-3Q9BYR4 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
KRTAP4-3Q9BYR4 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC4.85□□□□□ -1.63
KRTAP4-3Q9BYR4 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
KRTAP4-3Q9BYR4 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC4.85□□□□□ -1.63
KRTAP4-3Q9BYR4 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
KRTAP4-3Q9BYR4 AL009178.2-201ENST00000597278 2719 ntBASIC4.85□□□□□ -1.63
KRTAP4-3Q9BYR4 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
KRTAP4-3Q9BYR4 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
KRTAP4-3Q9BYR4 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC4.85□□□□□ -1.63
KRTAP4-3Q9BYR4 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
KRTAP4-3Q9BYR4 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
KRTAP4-3Q9BYR4 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
KRTAP4-3Q9BYR4 AC007191.1-201ENST00000623179 2995 ntBASIC4.85□□□□□ -1.63
KRTAP4-3Q9BYR4 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
KRTAP4-3Q9BYR4 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
KRTAP4-3Q9BYR4 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
KRTAP4-3Q9BYR4 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC4.85□□□□□ -1.63
KRTAP4-3Q9BYR4 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
KRTAP4-3Q9BYR4 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
KRTAP4-3Q9BYR4 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
KRTAP4-3Q9BYR4 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
KRTAP4-3Q9BYR4 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
KRTAP4-3Q9BYR4 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
KRTAP4-3Q9BYR4 CRIP3-202ENST00000372569 962 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
KRTAP4-3Q9BYR4 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
KRTAP4-3Q9BYR4 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC4.85□□□□□ -1.63
KRTAP4-3Q9BYR4 ARAF-202ENST00000377039 1271 ntTSL 2 BASIC4.85□□□□□ -1.63
KRTAP4-3Q9BYR4 MIR645-201ENST00000385283 94 ntBASIC4.85□□□□□ -1.63
KRTAP4-3Q9BYR4 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
KRTAP4-3Q9BYR4 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
KRTAP4-3Q9BYR4 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
KRTAP4-3Q9BYR4 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC4.85□□□□□ -1.63
KRTAP4-3Q9BYR4 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC4.85□□□□□ -1.63
KRTAP4-3Q9BYR4 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
KRTAP4-3Q9BYR4 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
KRTAP4-3Q9BYR4 HIST2H2BA-201ENST00000412169 381 ntBASIC4.85□□□□□ -1.63
KRTAP4-3Q9BYR4 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC4.85□□□□□ -1.63
KRTAP4-3Q9BYR4 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC4.85□□□□□ -1.63
KRTAP4-3Q9BYR4 AC108734.2-201ENST00000420887 1069 ntBASIC4.85□□□□□ -1.63
KRTAP4-3Q9BYR4 VEGFB-202ENST00000426086 979 ntAPPRIS ALT1 TSL 1 (best) BASIC4.85□□□□□ -1.63
KRTAP4-3Q9BYR4 PTGES3-203ENST00000436399 941 ntTSL 2 BASIC4.85□□□□□ -1.63
KRTAP4-3Q9BYR4 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC4.85□□□□□ -1.63
KRTAP4-3Q9BYR4 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC4.85□□□□□ -1.63
KRTAP4-3Q9BYR4 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC4.85□□□□□ -1.63
KRTAP4-3Q9BYR4 AC004837.1-201ENST00000446267 564 ntBASIC4.85□□□□□ -1.63
KRTAP4-3Q9BYR4 LINC00211-203ENST00000446799 662 ntTSL 3 BASIC4.85□□□□□ -1.63
KRTAP4-3Q9BYR4 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC4.85□□□□□ -1.63
KRTAP4-3Q9BYR4 MTND2P25-201ENST00000449028 610 ntBASIC4.85□□□□□ -1.63
KRTAP4-3Q9BYR4 AC096649.1-201ENST00000449168 497 ntTSL 3 BASIC4.85□□□□□ -1.63
KRTAP4-3Q9BYR4 IMPA1-203ENST00000449740 1180 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
KRTAP4-3Q9BYR4 DUTP3-201ENST00000450025 415 ntBASIC4.85□□□□□ -1.63
KRTAP4-3Q9BYR4 PIN4P1-201ENST00000451079 396 ntBASIC4.85□□□□□ -1.63
KRTAP4-3Q9BYR4 RPL18AP3-201ENST00000462885 528 ntBASIC4.85□□□□□ -1.63
KRTAP4-3Q9BYR4 RN7SL258P-201ENST00000478664 300 ntBASIC4.85□□□□□ -1.63
KRTAP4-3Q9BYR4 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC4.85□□□□□ -1.63
KRTAP4-3Q9BYR4 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC4.85□□□□□ -1.63
KRTAP4-3Q9BYR4 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC4.85□□□□□ -1.63
KRTAP4-3Q9BYR4 AP002803.1-201ENST00000528836 498 ntBASIC4.85□□□□□ -1.63
KRTAP4-3Q9BYR4 TMCO5B-205ENST00000530020 894 ntBASIC4.85□□□□□ -1.63
KRTAP4-3Q9BYR4 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC4.85□□□□□ -1.63
KRTAP4-3Q9BYR4 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
KRTAP4-3Q9BYR4 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
KRTAP4-3Q9BYR4 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC4.85□□□□□ -1.63
KRTAP4-3Q9BYR4 FAM227B-210ENST00000560246 911 ntAPPRIS ALT2 TSL 3 BASIC4.85□□□□□ -1.63
KRTAP4-3Q9BYR4 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC4.85□□□□□ -1.63
KRTAP4-3Q9BYR4 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC4.85□□□□□ -1.63
KRTAP4-3Q9BYR4 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC4.85□□□□□ -1.63
KRTAP4-3Q9BYR4 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
KRTAP4-3Q9BYR4 SRRM2-205ENST00000570971 1132 ntTSL 2 BASIC4.85□□□□□ -1.63
KRTAP4-3Q9BYR4 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC4.85□□□□□ -1.63
KRTAP4-3Q9BYR4 MIR4750-201ENST00000584564 56 ntBASIC4.85□□□□□ -1.63
KRTAP4-3Q9BYR4 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC4.85□□□□□ -1.63
KRTAP4-3Q9BYR4 ZNF528-AS1-202ENST00000596746 929 ntTSL 5 BASIC4.85□□□□□ -1.63
KRTAP4-3Q9BYR4 AC005632.3-201ENST00000605544 308 ntBASIC4.85□□□□□ -1.63
KRTAP4-3Q9BYR4 AP001065.2-201ENST00000617205 644 ntBASIC4.85□□□□□ -1.63
KRTAP4-3Q9BYR4 HIST1H3F-201ENST00000618052 411 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
KRTAP4-3Q9BYR4 LINC01746-201ENST00000621390 449 ntTSL 3 BASIC4.85□□□□□ -1.63
KRTAP4-3Q9BYR4 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC4.85□□□□□ -1.63
KRTAP4-3Q9BYR4 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
KRTAP4-3Q9BYR4 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
KRTAP4-3Q9BYR4 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC4.85□□□□□ -1.63
KRTAP4-3Q9BYR4 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
KRTAP4-3Q9BYR4 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
KRTAP4-3Q9BYR4 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
KRTAP4-3Q9BYR4 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
KRTAP4-3Q9BYR4 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
KRTAP4-3Q9BYR4 OXA1L-212ENST00000604262 1571 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
KRTAP4-3Q9BYR4 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
KRTAP4-3Q9BYR4 FGD4-203ENST00000472289 1629 ntTSL 2 BASIC4.85□□□□□ -1.63
KRTAP4-3Q9BYR4 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC4.85□□□□□ -1.63
KRTAP4-3Q9BYR4 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC4.85□□□□□ -1.63
KRTAP4-3Q9BYR4 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
KRTAP4-3Q9BYR4 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
KRTAP4-3Q9BYR4 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms