Protein–RNA interactions for Protein: Q9BQ50

TREX2, Three prime repair exonuclease 2, humanhuman

Predicted RBP Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX2Q9BQ50 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.25
TREX2Q9BQ50 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC13.52□□□□□ -0.25
TREX2Q9BQ50 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
TREX2Q9BQ50 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
TREX2Q9BQ50 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
TREX2Q9BQ50 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TREX2Q9BQ50 KRT8P19-201ENST00000551916 1455 ntBASIC13.52□□□□□ -0.25
TREX2Q9BQ50 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
TREX2Q9BQ50 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
TREX2Q9BQ50 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC13.52□□□□□ -0.25
TREX2Q9BQ50 CETP-203ENST00000566128 1733 ntTSL 5 BASIC13.52□□□□□ -0.25
TREX2Q9BQ50 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
TREX2Q9BQ50 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
TREX2Q9BQ50 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
TREX2Q9BQ50 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
TREX2Q9BQ50 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
TREX2Q9BQ50 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC13.52□□□□□ -0.25
TREX2Q9BQ50 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
TREX2Q9BQ50 FAM90A12P-201ENST00000519497 2375 ntBASIC13.52□□□□□ -0.25
TREX2Q9BQ50 FAM90A24P-201ENST00000520792 2369 ntBASIC13.52□□□□□ -0.25
TREX2Q9BQ50 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.25
TREX2Q9BQ50 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
TREX2Q9BQ50 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TREX2Q9BQ50 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC13.52□□□□□ -0.25
TREX2Q9BQ50 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
TREX2Q9BQ50 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
TREX2Q9BQ50 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
TREX2Q9BQ50 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TREX2Q9BQ50 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TREX2Q9BQ50 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TREX2Q9BQ50 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TREX2Q9BQ50 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TREX2Q9BQ50 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TREX2Q9BQ50 AC105206.1-202ENST00000314927 2368 ntBASIC13.51□□□□□ -0.25
TREX2Q9BQ50 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
TREX2Q9BQ50 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
TREX2Q9BQ50 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TREX2Q9BQ50 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
TREX2Q9BQ50 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
TREX2Q9BQ50 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
TREX2Q9BQ50 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TREX2Q9BQ50 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
TREX2Q9BQ50 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
TREX2Q9BQ50 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC13.51□□□□□ -0.25
TREX2Q9BQ50 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TREX2Q9BQ50 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
TREX2Q9BQ50 KRT8P4-201ENST00000509735 1454 ntBASIC13.51□□□□□ -0.25
TREX2Q9BQ50 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TREX2Q9BQ50 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TREX2Q9BQ50 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
TREX2Q9BQ50 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
TREX2Q9BQ50 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
TREX2Q9BQ50 AC010141.1-201ENST00000411585 623 ntBASIC13.51□□□□□ -0.25
TREX2Q9BQ50 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC13.51□□□□□ -0.25
TREX2Q9BQ50 RGS5-214ENST00000429865 754 ntTSL 3 BASIC13.51□□□□□ -0.25
TREX2Q9BQ50 GAS5-209ENST00000430245 723 ntTSL 3 BASIC13.51□□□□□ -0.25
TREX2Q9BQ50 FNTAP2-201ENST00000430308 634 ntBASIC13.51□□□□□ -0.25
TREX2Q9BQ50 POM121L10P-201ENST00000436994 1285 ntBASIC13.51□□□□□ -0.25
TREX2Q9BQ50 UPF3AP2-201ENST00000457924 1132 ntBASIC13.51□□□□□ -0.25
TREX2Q9BQ50 HIST2H2BC-201ENST00000498492 580 ntBASIC13.51□□□□□ -0.25
TREX2Q9BQ50 IGHVIII-5-2-201ENST00000522505 261 ntBASIC13.51□□□□□ -0.25
TREX2Q9BQ50 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC13.51□□□□□ -0.25
TREX2Q9BQ50 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC13.51□□□□□ -0.25
TREX2Q9BQ50 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC13.51□□□□□ -0.25
TREX2Q9BQ50 CYGB-203ENST00000589145 788 ntTSL 3 BASIC13.51□□□□□ -0.25
TREX2Q9BQ50 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC13.51□□□□□ -0.25
TREX2Q9BQ50 KLK3-207ENST00000595952 969 ntTSL 3 BASIC13.51□□□□□ -0.25
TREX2Q9BQ50 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC13.51□□□□□ -0.25
TREX2Q9BQ50 ZACNP1-201ENST00000612259 710 ntBASIC13.51□□□□□ -0.25
TREX2Q9BQ50 AL096828.3-201ENST00000615354 462 ntBASIC13.51□□□□□ -0.25
TREX2Q9BQ50 AC138627.1-207ENST00000641560 1006 ntBASIC13.51□□□□□ -0.25
TREX2Q9BQ50 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
TREX2Q9BQ50 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
TREX2Q9BQ50 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TREX2Q9BQ50 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
TREX2Q9BQ50 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
TREX2Q9BQ50 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TREX2Q9BQ50 CROT-203ENST00000419147 2959 ntTSL 2 BASIC13.51□□□□□ -0.25
TREX2Q9BQ50 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TREX2Q9BQ50 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TREX2Q9BQ50 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
TREX2Q9BQ50 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
TREX2Q9BQ50 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TREX2Q9BQ50 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
TREX2Q9BQ50 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC13.51□□□□□ -0.25
TREX2Q9BQ50 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC13.51□□□□□ -0.25
TREX2Q9BQ50 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TREX2Q9BQ50 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
TREX2Q9BQ50 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TREX2Q9BQ50 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
TREX2Q9BQ50 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC13.51□□□□□ -0.25
TREX2Q9BQ50 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
TREX2Q9BQ50 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC13.5□□□□□ -0.25
TREX2Q9BQ50 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
TREX2Q9BQ50 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TREX2Q9BQ50 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
TREX2Q9BQ50 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TREX2Q9BQ50 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
TREX2Q9BQ50 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TREX2Q9BQ50 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC13.5□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms