Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
VGLL1Q99990 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
VGLL1Q99990 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
VGLL1Q99990 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
VGLL1Q99990 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC10.93□□□□□ -0.66
VGLL1Q99990 RN7SKP175-201ENST00000408472 289 ntBASIC10.93□□□□□ -0.66
VGLL1Q99990 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC10.93□□□□□ -0.66
VGLL1Q99990 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
VGLL1Q99990 AL161932.2-201ENST00000435436 679 ntBASIC10.93□□□□□ -0.66
VGLL1Q99990 FAM207CP-201ENST00000443486 507 ntBASIC10.93□□□□□ -0.66
VGLL1Q99990 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC10.93□□□□□ -0.66
VGLL1Q99990 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC10.93□□□□□ -0.66
VGLL1Q99990 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC10.93□□□□□ -0.66
VGLL1Q99990 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC10.93□□□□□ -0.66
VGLL1Q99990 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC10.93□□□□□ -0.66
VGLL1Q99990 API5-211ENST00000534695 560 ntTSL 5 BASIC10.93□□□□□ -0.66
VGLL1Q99990 AC005586.2-201ENST00000563946 837 ntBASIC10.93□□□□□ -0.66
VGLL1Q99990 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC10.93□□□□□ -0.66
VGLL1Q99990 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC10.93□□□□□ -0.66
VGLL1Q99990 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC10.93□□□□□ -0.66
VGLL1Q99990 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
VGLL1Q99990 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
VGLL1Q99990 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
VGLL1Q99990 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
VGLL1Q99990 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
VGLL1Q99990 RNH1-224ENST00000534797 2973 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
VGLL1Q99990 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC10.93□□□□□ -0.66
VGLL1Q99990 SPDYE16-203ENST00000633306 2591 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
VGLL1Q99990 SLC5A9-210ENST00000533824 2219 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
VGLL1Q99990 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC10.93□□□□□ -0.66
VGLL1Q99990 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC10.93□□□□□ -0.66
VGLL1Q99990 ZNF275-201ENST00000370249 5920 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
VGLL1Q99990 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
VGLL1Q99990 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
VGLL1Q99990 MEST-206ENST00000416162 2158 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
VGLL1Q99990 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
VGLL1Q99990 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
VGLL1Q99990 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC10.93□□□□□ -0.66
VGLL1Q99990 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
VGLL1Q99990 UBFD1-207ENST00000567212 4727 ntAPPRIS ALT2 TSL 2 BASIC10.93□□□□□ -0.66
VGLL1Q99990 SPOCK2-201ENST00000317376 5328 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
VGLL1Q99990 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC10.93□□□□□ -0.66
VGLL1Q99990 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
VGLL1Q99990 TKFC-201ENST00000394900 4696 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
VGLL1Q99990 TTC39A-202ENST00000262676 6287 ntTSL 2 BASIC10.93□□□□□ -0.66
VGLL1Q99990 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC10.93□□□□□ -0.66
VGLL1Q99990 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC10.93□□□□□ -0.66
VGLL1Q99990 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
VGLL1Q99990 SLC16A1-201ENST00000369626 3910 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
VGLL1Q99990 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC10.92□□□□□ -0.66
VGLL1Q99990 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
VGLL1Q99990 AC239798.2-201ENST00000415338 3540 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
VGLL1Q99990 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC10.92□□□□□ -0.66
VGLL1Q99990 KIAA1683-201ENST00000392413 4402 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
VGLL1Q99990 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
VGLL1Q99990 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
VGLL1Q99990 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
VGLL1Q99990 AL928654.5-201ENST00000624831 2501 ntBASIC10.92□□□□□ -0.66
VGLL1Q99990 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC10.92□□□□□ -0.66
VGLL1Q99990 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
VGLL1Q99990 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
VGLL1Q99990 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC10.92□□□□□ -0.66
VGLL1Q99990 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
VGLL1Q99990 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC10.92□□□□□ -0.66
VGLL1Q99990 OSBPL5-201ENST00000263650 3889 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
VGLL1Q99990 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
VGLL1Q99990 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
VGLL1Q99990 POU2AF1-201ENST00000393067 3295 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
VGLL1Q99990 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
VGLL1Q99990 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
VGLL1Q99990 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC10.92□□□□□ -0.66
VGLL1Q99990 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
VGLL1Q99990 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
VGLL1Q99990 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
VGLL1Q99990 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
VGLL1Q99990 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
VGLL1Q99990 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC10.92□□□□□ -0.66
VGLL1Q99990 BAATP1-201ENST00000412284 1225 ntBASIC10.92□□□□□ -0.66
VGLL1Q99990 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC10.92□□□□□ -0.66
VGLL1Q99990 TSPY16P-201ENST00000449843 468 ntBASIC10.92□□□□□ -0.66
VGLL1Q99990 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC10.92□□□□□ -0.66
VGLL1Q99990 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC10.92□□□□□ -0.66
VGLL1Q99990 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
VGLL1Q99990 CDK4-206ENST00000549606 558 ntTSL 2 BASIC10.92□□□□□ -0.66
VGLL1Q99990 AC027796.2-201ENST00000575326 344 ntBASIC10.92□□□□□ -0.66
VGLL1Q99990 RN7SL48P-201ENST00000579283 293 ntBASIC10.92□□□□□ -0.66
VGLL1Q99990 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC10.92□□□□□ -0.66
VGLL1Q99990 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC10.92□□□□□ -0.66
VGLL1Q99990 KLK3-207ENST00000595952 969 ntTSL 3 BASIC10.92□□□□□ -0.66
VGLL1Q99990 AL033527.5-201ENST00000641382 801 ntBASIC10.92□□□□□ -0.66
VGLL1Q99990 USP6NL-205ENST00000609104 11377 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
VGLL1Q99990 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
VGLL1Q99990 DOT1L-201ENST00000398665 7436 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
VGLL1Q99990 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
VGLL1Q99990 TXNDC12-201ENST00000371626 2396 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
VGLL1Q99990 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC10.92□□□□□ -0.66
VGLL1Q99990 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC10.92□□□□□ -0.66
VGLL1Q99990 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
VGLL1Q99990 GULP1-207ENST00000409843 2643 ntAPPRIS ALT1 TSL 2 BASIC10.92□□□□□ -0.66
VGLL1Q99990 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC10.92□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 62.7 ms