Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC14.55□□□□□ -0.08
HLA-CQ95604 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
HLA-CQ95604 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HLA-CQ95604 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
HLA-CQ95604 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HLA-CQ95604 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
HLA-CQ95604 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC14.54□□□□□ -0.08
HLA-CQ95604 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HLA-CQ95604 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
HLA-CQ95604 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HLA-CQ95604 CSRP2-201ENST00000311083 943 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HLA-CQ95604 FTHL17-201ENST00000359202 813 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
HLA-CQ95604 GHRL-206ENST00000430179 856 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HLA-CQ95604 DMKN-211ENST00000436012 848 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
HLA-CQ95604 AC092865.2-201ENST00000439409 971 ntBASIC14.54□□□□□ -0.08
HLA-CQ95604 AL365500.1-201ENST00000442783 868 ntTSL 3 BASIC14.54□□□□□ -0.08
HLA-CQ95604 RPSAP69-201ENST00000445739 546 ntTSL 4 BASIC14.54□□□□□ -0.08
HLA-CQ95604 PSME2P2-201ENST00000453033 700 ntBASIC14.54□□□□□ -0.08
HLA-CQ95604 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
HLA-CQ95604 AL513165.2-203ENST00000537239 717 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
HLA-CQ95604 CSRP2-203ENST00000547435 632 ntTSL 2 BASIC14.54□□□□□ -0.08
HLA-CQ95604 AL512310.5-201ENST00000551999 515 ntBASIC14.54□□□□□ -0.08
HLA-CQ95604 TCL1A-209ENST00000557043 980 ntTSL 3 BASIC14.54□□□□□ -0.08
HLA-CQ95604 AC009065.4-201ENST00000563734 543 ntTSL 3 BASIC14.54□□□□□ -0.08
HLA-CQ95604 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC14.54□□□□□ -0.08
HLA-CQ95604 MIR8071-1-201ENST00000616769 65 ntBASIC14.54□□□□□ -0.08
HLA-CQ95604 MIR8071-2-201ENST00000616772 65 ntBASIC14.54□□□□□ -0.08
HLA-CQ95604 ZFAS1-208ENST00000618800 597 ntTSL 3 BASIC14.54□□□□□ -0.08
HLA-CQ95604 AL157762.1-201ENST00000619612 415 ntBASIC14.54□□□□□ -0.08
HLA-CQ95604 NAP1L1-226ENST00000552342 1526 ntTSL 5 BASIC14.54□□□□□ -0.08
HLA-CQ95604 AC008620.2-201ENST00000510294 1569 ntBASIC14.54□□□□□ -0.08
HLA-CQ95604 HORMAD1-202ENST00000361824 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HLA-CQ95604 EDEM2-201ENST00000374491 1756 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
HLA-CQ95604 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HLA-CQ95604 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
HLA-CQ95604 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HLA-CQ95604 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC14.54□□□□□ -0.08
HLA-CQ95604 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
HLA-CQ95604 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
HLA-CQ95604 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
HLA-CQ95604 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
HLA-CQ95604 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC14.54□□□□□ -0.08
HLA-CQ95604 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC14.54□□□□□ -0.08
HLA-CQ95604 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HLA-CQ95604 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
HLA-CQ95604 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HLA-CQ95604 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HLA-CQ95604 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
HLA-CQ95604 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HLA-CQ95604 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC14.53□□□□□ -0.08
HLA-CQ95604 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
HLA-CQ95604 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
HLA-CQ95604 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HLA-CQ95604 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
HLA-CQ95604 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC14.53□□□□□ -0.08
HLA-CQ95604 LIPA-205ENST00000456827 2527 ntTSL 3 BASIC14.53□□□□□ -0.08
HLA-CQ95604 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HLA-CQ95604 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC14.53□□□□□ -0.08
HLA-CQ95604 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC14.53□□□□□ -0.08
HLA-CQ95604 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HLA-CQ95604 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
HLA-CQ95604 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
HLA-CQ95604 INSC-205ENST00000525218 1576 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
HLA-CQ95604 UCP2-202ENST00000536983 1413 ntTSL 5 BASIC14.53□□□□□ -0.08
HLA-CQ95604 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HLA-CQ95604 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HLA-CQ95604 HIGD2A-201ENST00000274787 668 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HLA-CQ95604 XAGE2-201ENST00000286049 618 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HLA-CQ95604 RPL10L-201ENST00000298283 812 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
HLA-CQ95604 CALML6-201ENST00000307786 1101 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
HLA-CQ95604 KRTAP12-2-201ENST00000360770 739 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
HLA-CQ95604 RNA5SP491-201ENST00000362936 118 ntBASIC14.53□□□□□ -0.08
HLA-CQ95604 SLC35A2-203ENST00000376515 1044 ntTSL 3 BASIC14.53□□□□□ -0.08
HLA-CQ95604 THYN1-203ENST00000392594 943 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HLA-CQ95604 SLC12A9-AS1-201ENST00000412754 369 ntTSL 3 BASIC14.53□□□□□ -0.08
HLA-CQ95604 PHBP10-201ENST00000416467 784 ntBASIC14.53□□□□□ -0.08
HLA-CQ95604 AL359182.1-201ENST00000435915 469 ntTSL 3 BASIC14.53□□□□□ -0.08
HLA-CQ95604 YY1P2-201ENST00000438766 948 ntBASIC14.53□□□□□ -0.08
HLA-CQ95604 AC103563.2-201ENST00000442200 597 ntTSL 5 BASIC14.53□□□□□ -0.08
HLA-CQ95604 RN7SL363P-201ENST00000482412 273 ntBASIC14.53□□□□□ -0.08
HLA-CQ95604 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC14.53□□□□□ -0.08
HLA-CQ95604 IGHVII-74-1-201ENST00000517572 241 ntBASIC14.53□□□□□ -0.08
HLA-CQ95604 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC14.53□□□□□ -0.08
HLA-CQ95604 LIMD2-210ENST00000582055 509 ntTSL 2 BASIC14.53□□□□□ -0.08
HLA-CQ95604 AC130324.1-201ENST00000584157 831 ntTSL 3 BASIC14.53□□□□□ -0.08
HLA-CQ95604 AC022001.3-201ENST00000606330 596 ntBASIC14.53□□□□□ -0.08
HLA-CQ95604 Metazoa_SRP.210-201ENST00000637921 244 ntBASIC14.53□□□□□ -0.08
HLA-CQ95604 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
HLA-CQ95604 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC14.53□□□□□ -0.08
HLA-CQ95604 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HLA-CQ95604 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
HLA-CQ95604 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
HLA-CQ95604 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
HLA-CQ95604 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC14.53□□□□□ -0.08
HLA-CQ95604 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
HLA-CQ95604 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC14.53□□□□□ -0.08
HLA-CQ95604 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
HLA-CQ95604 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HLA-CQ95604 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
HLA-CQ95604 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms