Protein–RNA interactions for Protein: Q92576

PHF3, PHD finger protein 3, humanhuman

Known RBP Predictions only

Length 2,039 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3Q92576 LRRFIP1-202ENST00000289175 3709 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
PHF3Q92576 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
PHF3Q92576 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
PHF3Q92576 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
PHF3Q92576 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
PHF3Q92576 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
PHF3Q92576 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
PHF3Q92576 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
PHF3Q92576 LINC01815-202ENST00000641468 1409 ntBASIC12.88□□□□□ -0.35
PHF3Q92576 AC009093.10-201ENST00000641956 1442 ntBASIC12.88□□□□□ -0.35
PHF3Q92576 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
PHF3Q92576 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
PHF3Q92576 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC12.88□□□□□ -0.35
PHF3Q92576 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC12.88□□□□□ -0.35
PHF3Q92576 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
PHF3Q92576 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC12.88□□□□□ -0.35
PHF3Q92576 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
PHF3Q92576 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC12.88□□□□□ -0.35
PHF3Q92576 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
PHF3Q92576 GEMIN7-202ENST00000391951 716 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
PHF3Q92576 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
PHF3Q92576 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC12.88□□□□□ -0.35
PHF3Q92576 AC073869.2-201ENST00000417338 1026 ntBASIC12.88□□□□□ -0.35
PHF3Q92576 DNAJB1P1-201ENST00000429417 1024 ntBASIC12.88□□□□□ -0.35
PHF3Q92576 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC12.88□□□□□ -0.35
PHF3Q92576 NCK1-AS1-203ENST00000474250 827 ntTSL 2 BASIC12.88□□□□□ -0.35
PHF3Q92576 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
PHF3Q92576 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
PHF3Q92576 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC12.88□□□□□ -0.35
PHF3Q92576 AC124068.2-201ENST00000569473 1109 ntBASIC12.88□□□□□ -0.35
PHF3Q92576 AC073352.2-201ENST00000609385 439 ntBASIC12.88□□□□□ -0.35
PHF3Q92576 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC12.88□□□□□ -0.35
PHF3Q92576 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC12.88□□□□□ -0.35
PHF3Q92576 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC12.88□□□□□ -0.35
PHF3Q92576 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
PHF3Q92576 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
PHF3Q92576 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
PHF3Q92576 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
PHF3Q92576 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
PHF3Q92576 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
PHF3Q92576 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
PHF3Q92576 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
PHF3Q92576 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
PHF3Q92576 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC12.88□□□□□ -0.35
PHF3Q92576 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
PHF3Q92576 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
PHF3Q92576 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
PHF3Q92576 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC12.88□□□□□ -0.35
PHF3Q92576 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
PHF3Q92576 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
PHF3Q92576 MARK2P16-201ENST00000605714 1723 ntBASIC12.88□□□□□ -0.35
PHF3Q92576 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC12.88□□□□□ -0.35
PHF3Q92576 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
PHF3Q92576 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
PHF3Q92576 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
PHF3Q92576 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
PHF3Q92576 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
PHF3Q92576 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
PHF3Q92576 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
PHF3Q92576 RBM4B-202ENST00000524637 867 ntTSL 5 BASIC12.88□□□□□ -0.35
PHF3Q92576 AC003686.1-201ENST00000550956 1034 ntBASIC12.88□□□□□ -0.35
PHF3Q92576 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC12.88□□□□□ -0.35
PHF3Q92576 KRT8P1-201ENST00000557533 1207 ntBASIC12.88□□□□□ -0.35
PHF3Q92576 AC006435.2-201ENST00000574290 846 ntTSL 5 BASIC12.88□□□□□ -0.35
PHF3Q92576 RN7SL665P-201ENST00000578793 300 ntBASIC12.88□□□□□ -0.35
PHF3Q92576 AP001065.2-201ENST00000617205 644 ntBASIC12.88□□□□□ -0.35
PHF3Q92576 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC12.88□□□□□ -0.35
PHF3Q92576 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC12.88□□□□□ -0.35
PHF3Q92576 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC12.88□□□□□ -0.35
PHF3Q92576 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
PHF3Q92576 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC12.88□□□□□ -0.35
PHF3Q92576 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
PHF3Q92576 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
PHF3Q92576 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC12.87□□□□□ -0.35
PHF3Q92576 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
PHF3Q92576 MYO15B-237ENST00000642007 4893 ntBASIC12.87□□□□□ -0.35
PHF3Q92576 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
PHF3Q92576 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
PHF3Q92576 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
PHF3Q92576 PPP1R1B-202ENST00000394265 1419 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
PHF3Q92576 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
PHF3Q92576 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC12.87□□□□□ -0.35
PHF3Q92576 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
PHF3Q92576 F10-203ENST00000409306 1450 ntTSL 3 BASIC12.87□□□□□ -0.35
PHF3Q92576 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
PHF3Q92576 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC12.87□□□□□ -0.35
PHF3Q92576 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
PHF3Q92576 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC12.87□□□□□ -0.35
PHF3Q92576 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
PHF3Q92576 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC12.87□□□□□ -0.35
PHF3Q92576 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC12.87□□□□□ -0.35
PHF3Q92576 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
PHF3Q92576 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
PHF3Q92576 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
PHF3Q92576 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
PHF3Q92576 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC12.87□□□□□ -0.35
PHF3Q92576 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC12.87□□□□□ -0.35
PHF3Q92576 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC12.87□□□□□ -0.35
PHF3Q92576 SCARNA12-201ENST00000459155 270 ntBASIC12.87□□□□□ -0.35
PHF3Q92576 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms