Protein–RNA interactions for Protein: Q8NF37

LPCAT1, Lysophosphatidylcholine acyltransferase 1, humanhuman

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT1Q8NF37 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
LPCAT1Q8NF37 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LPCAT1Q8NF37 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LPCAT1Q8NF37 BANP-203ENST00000393207 2438 ntTSL 2 BASIC14.44□□□□□ -0.1
LPCAT1Q8NF37 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
LPCAT1Q8NF37 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LPCAT1Q8NF37 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
LPCAT1Q8NF37 AL157996.1-201ENST00000624684 2299 ntBASIC14.44□□□□□ -0.1
LPCAT1Q8NF37 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LPCAT1Q8NF37 AL031595.1-201ENST00000623969 4709 ntBASIC14.44□□□□□ -0.1
LPCAT1Q8NF37 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LPCAT1Q8NF37 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LPCAT1Q8NF37 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
LPCAT1Q8NF37 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LPCAT1Q8NF37 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LPCAT1Q8NF37 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC14.44□□□□□ -0.1
LPCAT1Q8NF37 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
LPCAT1Q8NF37 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LPCAT1Q8NF37 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LPCAT1Q8NF37 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
LPCAT1Q8NF37 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
LPCAT1Q8NF37 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
LPCAT1Q8NF37 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LPCAT1Q8NF37 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LPCAT1Q8NF37 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC14.44□□□□□ -0.1
LPCAT1Q8NF37 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC14.44□□□□□ -0.1
LPCAT1Q8NF37 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC14.44□□□□□ -0.1
LPCAT1Q8NF37 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC14.44□□□□□ -0.1
LPCAT1Q8NF37 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC14.44□□□□□ -0.1
LPCAT1Q8NF37 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC14.44□□□□□ -0.1
LPCAT1Q8NF37 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC14.44□□□□□ -0.1
LPCAT1Q8NF37 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
LPCAT1Q8NF37 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC14.44□□□□□ -0.1
LPCAT1Q8NF37 MIR6787-201ENST00000616675 61 ntBASIC14.44□□□□□ -0.1
LPCAT1Q8NF37 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LPCAT1Q8NF37 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LPCAT1Q8NF37 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LPCAT1Q8NF37 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
LPCAT1Q8NF37 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC14.44□□□□□ -0.1
LPCAT1Q8NF37 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LPCAT1Q8NF37 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LPCAT1Q8NF37 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
LPCAT1Q8NF37 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
LPCAT1Q8NF37 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LPCAT1Q8NF37 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LPCAT1Q8NF37 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
LPCAT1Q8NF37 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC14.44□□□□□ -0.1
LPCAT1Q8NF37 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
LPCAT1Q8NF37 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC14.44□□□□□ -0.1
LPCAT1Q8NF37 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LPCAT1Q8NF37 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
LPCAT1Q8NF37 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LPCAT1Q8NF37 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LPCAT1Q8NF37 LRRFIP1-202ENST00000289175 3709 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
LPCAT1Q8NF37 TUBBP5-203ENST00000508529 1334 ntBASIC14.43□□□□□ -0.1
LPCAT1Q8NF37 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC14.43□□□□□ -0.1
LPCAT1Q8NF37 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
LPCAT1Q8NF37 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
LPCAT1Q8NF37 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC14.43□□□□□ -0.1
LPCAT1Q8NF37 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC14.43□□□□□ -0.1
LPCAT1Q8NF37 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
LPCAT1Q8NF37 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
LPCAT1Q8NF37 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LPCAT1Q8NF37 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
LPCAT1Q8NF37 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LPCAT1Q8NF37 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC14.43□□□□□ -0.1
LPCAT1Q8NF37 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LPCAT1Q8NF37 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC14.43□□□□□ -0.1
LPCAT1Q8NF37 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
LPCAT1Q8NF37 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
LPCAT1Q8NF37 RNA5SP359-201ENST00000364838 113 ntBASIC14.43□□□□□ -0.1
LPCAT1Q8NF37 NCR3-202ENST00000376071 541 ntTSL 5 BASIC14.43□□□□□ -0.1
LPCAT1Q8NF37 ACTG1P2-201ENST00000415776 1125 ntBASIC14.43□□□□□ -0.1
LPCAT1Q8NF37 ACTG1P11-201ENST00000425411 1125 ntBASIC14.43□□□□□ -0.1
LPCAT1Q8NF37 SPTLC1P5-201ENST00000450718 252 ntBASIC14.43□□□□□ -0.1
LPCAT1Q8NF37 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC14.43□□□□□ -0.1
LPCAT1Q8NF37 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
LPCAT1Q8NF37 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC14.43□□□□□ -0.1
LPCAT1Q8NF37 AL512310.5-201ENST00000551999 515 ntBASIC14.43□□□□□ -0.1
LPCAT1Q8NF37 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC14.43□□□□□ -0.1
LPCAT1Q8NF37 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC14.43□□□□□ -0.1
LPCAT1Q8NF37 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC14.43□□□□□ -0.1
LPCAT1Q8NF37 AC100757.4-201ENST00000626934 759 ntBASIC14.43□□□□□ -0.1
LPCAT1Q8NF37 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LPCAT1Q8NF37 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
LPCAT1Q8NF37 LINC01165-201ENST00000445190 1623 ntBASIC14.43□□□□□ -0.1
LPCAT1Q8NF37 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LPCAT1Q8NF37 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC14.43□□□□□ -0.1
LPCAT1Q8NF37 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC14.43□□□□□ -0.1
LPCAT1Q8NF37 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC14.43□□□□□ -0.1
LPCAT1Q8NF37 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC14.43□□□□□ -0.1
LPCAT1Q8NF37 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LPCAT1Q8NF37 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC14.43□□□□□ -0.1
LPCAT1Q8NF37 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
LPCAT1Q8NF37 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
LPCAT1Q8NF37 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LPCAT1Q8NF37 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
LPCAT1Q8NF37 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
LPCAT1Q8NF37 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
LPCAT1Q8NF37 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 266.9 ms