Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 CD79B-203ENST00000392795 1254 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CDC42BPAQ5VT25 SNORD23-201ENST00000408876 110 ntBASIC20.77■□□□□ 0.92
CDC42BPAQ5VT25 AC010900.1-201ENST00000449849 1296 ntBASIC20.77■□□□□ 0.92
CDC42BPAQ5VT25 MTHFD2P7-201ENST00000483867 983 ntBASIC20.77■□□□□ 0.92
CDC42BPAQ5VT25 SMIM15-202ENST00000507416 584 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
CDC42BPAQ5VT25 AC023389.1-201ENST00000577846 576 ntTSL 4 BASIC20.77■□□□□ 0.92
CDC42BPAQ5VT25 AC005786.2-201ENST00000592368 369 ntTSL 3 BASIC20.77■□□□□ 0.92
CDC42BPAQ5VT25 AP000553.2-201ENST00000609038 441 ntBASIC20.77■□□□□ 0.92
CDC42BPAQ5VT25 DAXX-201ENST00000266000 2606 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
CDC42BPAQ5VT25 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
CDC42BPAQ5VT25 DDC-212ENST00000615193 1674 ntTSL 3 BASIC20.77■□□□□ 0.91
CDC42BPAQ5VT25 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
CDC42BPAQ5VT25 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
CDC42BPAQ5VT25 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CDC42BPAQ5VT25 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CDC42BPAQ5VT25 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CDC42BPAQ5VT25 GLP2R-204ENST00000574745 1882 ntTSL 2 BASIC20.76■□□□□ 0.91
CDC42BPAQ5VT25 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
CDC42BPAQ5VT25 AC011284.1-201ENST00000427920 856 ntTSL 4 BASIC20.76■□□□□ 0.91
CDC42BPAQ5VT25 NRSN2-206ENST00000608736 712 ntTSL 3 BASIC20.76■□□□□ 0.91
CDC42BPAQ5VT25 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CDC42BPAQ5VT25 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CDC42BPAQ5VT25 STAMBP-204ENST00000409707 1649 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
CDC42BPAQ5VT25 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CDC42BPAQ5VT25 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC20.76■□□□□ 0.91
CDC42BPAQ5VT25 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CDC42BPAQ5VT25 CTRL-205ENST00000574481 1721 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CDC42BPAQ5VT25 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CDC42BPAQ5VT25 OR2V1-204ENST00000641551 2423 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
CDC42BPAQ5VT25 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
CDC42BPAQ5VT25 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC20.76■□□□□ 0.91
CDC42BPAQ5VT25 TXLNGY-202ENST00000407724 1000 ntTSL 3 BASIC20.75■□□□□ 0.91
CDC42BPAQ5VT25 YY1P2-201ENST00000438766 948 ntBASIC20.75■□□□□ 0.91
CDC42BPAQ5VT25 AL662797.1-201ENST00000442852 799 ntTSL 3 BASIC20.75■□□□□ 0.91
CDC42BPAQ5VT25 AC104212.2-201ENST00000478813 628 ntBASIC20.75■□□□□ 0.91
CDC42BPAQ5VT25 EVX1-AS-203ENST00000519218 554 ntTSL 4 BASIC20.75■□□□□ 0.91
CDC42BPAQ5VT25 BCDIN3D-AS1-202ENST00000549124 468 ntTSL 3 BASIC20.75■□□□□ 0.91
CDC42BPAQ5VT25 AF111169.3-201ENST00000553991 756 ntTSL 5 BASIC20.75■□□□□ 0.91
CDC42BPAQ5VT25 ZNF235-203ENST00000589248 532 ntTSL 3 BASIC20.75■□□□□ 0.91
CDC42BPAQ5VT25 AL645608.7-201ENST00000607769 351 ntTSL 4 BASIC20.75■□□□□ 0.91
CDC42BPAQ5VT25 AC139100.2-201ENST00000616901 662 ntBASIC20.75■□□□□ 0.91
CDC42BPAQ5VT25 SFTPA2-205ENST00000640627 195 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CDC42BPAQ5VT25 MUC1-225ENST00000612778 1836 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
CDC42BPAQ5VT25 AC034205.3-201ENST00000603595 1376 ntBASIC20.75■□□□□ 0.91
CDC42BPAQ5VT25 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CDC42BPAQ5VT25 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
CDC42BPAQ5VT25 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CDC42BPAQ5VT25 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC20.75■□□□□ 0.91
CDC42BPAQ5VT25 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.75■□□□□ 0.91
CDC42BPAQ5VT25 CKAP2-202ENST00000378034 1972 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CDC42BPAQ5VT25 PINX1-201ENST00000314787 1545 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
CDC42BPAQ5VT25 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC20.75■□□□□ 0.91
CDC42BPAQ5VT25 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CDC42BPAQ5VT25 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC20.75■□□□□ 0.91
CDC42BPAQ5VT25 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC20.75■□□□□ 0.91
CDC42BPAQ5VT25 SEPT10-208ENST00000437928 1782 ntTSL 5 BASIC20.75■□□□□ 0.91
CDC42BPAQ5VT25 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CDC42BPAQ5VT25 AL928654.5-201ENST00000624831 2501 ntBASIC20.75■□□□□ 0.91
CDC42BPAQ5VT25 AIFM1-203ENST00000346424 1200 ntTSL 2 BASIC20.75■□□□□ 0.91
CDC42BPAQ5VT25 HLA-W-207ENST00000439514 771 ntBASIC20.75■□□□□ 0.91
CDC42BPAQ5VT25 CXXC1P1-202ENST00000489409 1212 ntBASIC20.75■□□□□ 0.91
CDC42BPAQ5VT25 AC011431.1-201ENST00000512971 230 ntBASIC20.75■□□□□ 0.91
CDC42BPAQ5VT25 AC022784.6-202ENST00000523246 674 ntTSL 5 BASIC20.75■□□□□ 0.91
CDC42BPAQ5VT25 AC004231.3-201ENST00000579136 258 ntTSL 3 BASIC20.75■□□□□ 0.91
CDC42BPAQ5VT25 RPS5-205ENST00000598495 800 ntTSL 3 BASIC20.75■□□□□ 0.91
CDC42BPAQ5VT25 Z82244.1-201ENST00000631502 840 ntBASIC20.75■□□□□ 0.91
CDC42BPAQ5VT25 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
CDC42BPAQ5VT25 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
CDC42BPAQ5VT25 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
CDC42BPAQ5VT25 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CDC42BPAQ5VT25 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CDC42BPAQ5VT25 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
CDC42BPAQ5VT25 SLC25A3-202ENST00000228318 1678 ntAPPRIS P4 TSL 5 BASIC20.74■□□□□ 0.91
CDC42BPAQ5VT25 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CDC42BPAQ5VT25 ATP1B3-201ENST00000286371 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CDC42BPAQ5VT25 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CDC42BPAQ5VT25 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CDC42BPAQ5VT25 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CDC42BPAQ5VT25 PPP1R7-205ENST00000404405 1009 ntTSL 3 BASIC20.74■□□□□ 0.91
CDC42BPAQ5VT25 POLR2F-202ENST00000405557 560 ntTSL 5 BASIC20.74■□□□□ 0.91
CDC42BPAQ5VT25 ATXN8OS-202ENST00000424524 1236 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CDC42BPAQ5VT25 AL121894.1-201ENST00000450971 436 ntTSL 2 BASIC20.74■□□□□ 0.91
CDC42BPAQ5VT25 AL353653.1-201ENST00000452336 638 ntTSL 2 BASIC20.74■□□□□ 0.91
CDC42BPAQ5VT25 AC114812.4-201ENST00000506676 757 ntBASIC20.74■□□□□ 0.91
CDC42BPAQ5VT25 ACER3-205ENST00000526597 1269 ntTSL 2 BASIC20.74■□□□□ 0.91
CDC42BPAQ5VT25 AP002495.1-205ENST00000529513 655 ntAPPRIS ALT2 TSL 3 BASIC20.74■□□□□ 0.91
CDC42BPAQ5VT25 AP000439.2-201ENST00000542064 726 ntTSL 2 BASIC20.74■□□□□ 0.91
CDC42BPAQ5VT25 AC007298.2-201ENST00000551849 862 ntTSL 3 BASIC20.74■□□□□ 0.91
CDC42BPAQ5VT25 POLR2F-213ENST00000606538 760 ntTSL 2 BASIC20.74■□□□□ 0.91
CDC42BPAQ5VT25 LINC00969-322ENST00000630170 584 ntTSL 5 BASIC20.74■□□□□ 0.91
CDC42BPAQ5VT25 AC006207.1-201ENST00000637958 562 ntTSL 5 BASIC20.74■□□□□ 0.91
CDC42BPAQ5VT25 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CDC42BPAQ5VT25 CCDC42-201ENST00000293845 1374 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
CDC42BPAQ5VT25 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
CDC42BPAQ5VT25 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC20.74■□□□□ 0.91
CDC42BPAQ5VT25 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CDC42BPAQ5VT25 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC20.74■□□□□ 0.91
CDC42BPAQ5VT25 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CDC42BPAQ5VT25 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CDC42BPAQ5VT25 MORN4-201ENST00000307450 2315 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms