Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
H3F3AP84243 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
H3F3AP84243 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
H3F3AP84243 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
H3F3AP84243 AC239868.1-201ENST00000369385 493 ntBASIC12.79□□□□□ -0.36
H3F3AP84243 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
H3F3AP84243 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC12.79□□□□□ -0.36
H3F3AP84243 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC12.79□□□□□ -0.36
H3F3AP84243 SDHD-202ENST00000525291 790 ntTSL 3 BASIC12.79□□□□□ -0.36
H3F3AP84243 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC12.79□□□□□ -0.36
H3F3AP84243 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
H3F3AP84243 AC093752.3-201ENST00000567343 901 ntBASIC12.79□□□□□ -0.36
H3F3AP84243 RN7SL774P-201ENST00000577467 290 ntBASIC12.79□□□□□ -0.36
H3F3AP84243 SKA2-205ENST00000580541 689 ntTSL 3 BASIC12.79□□□□□ -0.36
H3F3AP84243 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC12.79□□□□□ -0.36
H3F3AP84243 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC12.79□□□□□ -0.36
H3F3AP84243 NDUFV2P1-201ENST00000596415 907 ntBASIC12.79□□□□□ -0.36
H3F3AP84243 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
H3F3AP84243 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
H3F3AP84243 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC12.79□□□□□ -0.36
H3F3AP84243 AL022334.2-201ENST00000610000 484 ntBASIC12.79□□□□□ -0.36
H3F3AP84243 AC244093.1-201ENST00000610837 814 ntBASIC12.79□□□□□ -0.36
H3F3AP84243 MIR6787-201ENST00000616675 61 ntBASIC12.79□□□□□ -0.36
H3F3AP84243 GPR182-203ENST00000622922 591 ntBASIC12.79□□□□□ -0.36
H3F3AP84243 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
H3F3AP84243 AL157996.1-201ENST00000624684 2299 ntBASIC12.79□□□□□ -0.36
H3F3AP84243 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
H3F3AP84243 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC12.79□□□□□ -0.36
H3F3AP84243 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
H3F3AP84243 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
H3F3AP84243 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
H3F3AP84243 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
H3F3AP84243 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
H3F3AP84243 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
H3F3AP84243 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC12.79□□□□□ -0.36
H3F3AP84243 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
H3F3AP84243 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
H3F3AP84243 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
H3F3AP84243 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC12.79□□□□□ -0.36
H3F3AP84243 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
H3F3AP84243 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
H3F3AP84243 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
H3F3AP84243 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
H3F3AP84243 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
H3F3AP84243 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
H3F3AP84243 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
H3F3AP84243 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
H3F3AP84243 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
H3F3AP84243 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
H3F3AP84243 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
H3F3AP84243 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC12.78□□□□□ -0.36
H3F3AP84243 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC12.78□□□□□ -0.36
H3F3AP84243 RDX-218ENST00000544551 4117 ntTSL 2 BASIC12.78□□□□□ -0.36
H3F3AP84243 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
H3F3AP84243 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC12.78□□□□□ -0.36
H3F3AP84243 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
H3F3AP84243 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
H3F3AP84243 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
H3F3AP84243 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC12.78□□□□□ -0.36
H3F3AP84243 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
H3F3AP84243 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
H3F3AP84243 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
H3F3AP84243 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
H3F3AP84243 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC12.78□□□□□ -0.36
H3F3AP84243 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
H3F3AP84243 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC12.78□□□□□ -0.36
H3F3AP84243 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
H3F3AP84243 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
H3F3AP84243 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
H3F3AP84243 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
H3F3AP84243 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
H3F3AP84243 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
H3F3AP84243 NCR3-202ENST00000376071 541 ntTSL 5 BASIC12.78□□□□□ -0.36
H3F3AP84243 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
H3F3AP84243 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
H3F3AP84243 CALR4P-201ENST00000431943 946 ntBASIC12.78□□□□□ -0.36
H3F3AP84243 AL596276.2-201ENST00000447525 331 ntBASIC12.78□□□□□ -0.36
H3F3AP84243 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
H3F3AP84243 REEP1-202ENST00000453231 940 ntTSL 2 BASIC12.78□□□□□ -0.36
H3F3AP84243 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
H3F3AP84243 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC12.78□□□□□ -0.36
H3F3AP84243 AC099548.2-209ENST00000480264 625 ntBASIC12.78□□□□□ -0.36
H3F3AP84243 RERG-205ENST00000537647 935 ntTSL 2 BASIC12.78□□□□□ -0.36
H3F3AP84243 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC12.78□□□□□ -0.36
H3F3AP84243 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC12.78□□□□□ -0.36
H3F3AP84243 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC12.78□□□□□ -0.36
H3F3AP84243 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC12.78□□□□□ -0.36
H3F3AP84243 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC12.78□□□□□ -0.36
H3F3AP84243 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC12.78□□□□□ -0.36
H3F3AP84243 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
H3F3AP84243 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
H3F3AP84243 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
H3F3AP84243 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
H3F3AP84243 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
H3F3AP84243 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
H3F3AP84243 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
H3F3AP84243 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
H3F3AP84243 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
H3F3AP84243 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
H3F3AP84243 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 71.6 ms