Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 ST20-AS1-201ENST00000560255 4223 ntBASIC13.52□□□□□ -0.24
RAE1P78406 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.24
RAE1P78406 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.24
RAE1P78406 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC13.52□□□□□ -0.24
RAE1P78406 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC13.52□□□□□ -0.24
RAE1P78406 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
RAE1P78406 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
RAE1P78406 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
RAE1P78406 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC13.52□□□□□ -0.25
RAE1P78406 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC13.52□□□□□ -0.25
RAE1P78406 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC13.52□□□□□ -0.25
RAE1P78406 APOA2-204ENST00000464492 530 ntTSL 3 BASIC13.52□□□□□ -0.25
RAE1P78406 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC13.52□□□□□ -0.25
RAE1P78406 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC13.52□□□□□ -0.25
RAE1P78406 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC13.52□□□□□ -0.25
RAE1P78406 NOP2-220ENST00000545915 630 ntTSL 2 BASIC13.52□□□□□ -0.25
RAE1P78406 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC13.52□□□□□ -0.25
RAE1P78406 MIR3615-201ENST00000581999 87 ntBASIC13.52□□□□□ -0.25
RAE1P78406 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC13.52□□□□□ -0.25
RAE1P78406 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC13.52□□□□□ -0.25
RAE1P78406 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
RAE1P78406 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC13.52□□□□□ -0.25
RAE1P78406 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
RAE1P78406 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC13.52□□□□□ -0.25
RAE1P78406 RPL13AP3-202ENST00000494676 1473 ntBASIC13.52□□□□□ -0.25
RAE1P78406 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
RAE1P78406 AL359845.1-201ENST00000458202 1648 ntBASIC13.52□□□□□ -0.25
RAE1P78406 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC13.52□□□□□ -0.25
RAE1P78406 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
RAE1P78406 ZNF263-202ENST00000538765 1721 ntTSL 2 BASIC13.52□□□□□ -0.25
RAE1P78406 AMT-256ENST00000638063 1783 ntTSL 5 BASIC13.52□□□□□ -0.25
RAE1P78406 APOBEC3D-202ENST00000427494 1961 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
RAE1P78406 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC13.52□□□□□ -0.25
RAE1P78406 MCPH1-AS1-201ENST00000515608 2147 ntTSL 5 BASIC13.52□□□□□ -0.25
RAE1P78406 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC13.52□□□□□ -0.25
RAE1P78406 TCAF1P1-201ENST00000414990 2232 ntBASIC13.52□□□□□ -0.25
RAE1P78406 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
RAE1P78406 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
RAE1P78406 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
RAE1P78406 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC13.52□□□□□ -0.25
RAE1P78406 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC13.52□□□□□ -0.25
RAE1P78406 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
RAE1P78406 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
RAE1P78406 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
RAE1P78406 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
RAE1P78406 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
RAE1P78406 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC13.51□□□□□ -0.25
RAE1P78406 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RAE1P78406 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
RAE1P78406 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RAE1P78406 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
RAE1P78406 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
RAE1P78406 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
RAE1P78406 NXF1-201ENST00000294172 2346 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RAE1P78406 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
RAE1P78406 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC13.51□□□□□ -0.25
RAE1P78406 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
RAE1P78406 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
RAE1P78406 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
RAE1P78406 LINC01285-204ENST00000634601 1947 ntTSL 5 BASIC13.51□□□□□ -0.25
RAE1P78406 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC13.51□□□□□ -0.25
RAE1P78406 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC13.51□□□□□ -0.25
RAE1P78406 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
RAE1P78406 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RAE1P78406 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
RAE1P78406 HOXC4-202ENST00000430889 1666 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RAE1P78406 ABCD1P2-201ENST00000429313 1601 ntBASIC13.51□□□□□ -0.25
RAE1P78406 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RAE1P78406 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
RAE1P78406 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
RAE1P78406 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RAE1P78406 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC13.51□□□□□ -0.25
RAE1P78406 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RAE1P78406 TUBB1P2-201ENST00000422712 1306 ntBASIC13.51□□□□□ -0.25
RAE1P78406 TUBB1P1-201ENST00000503144 1300 ntBASIC13.51□□□□□ -0.25
RAE1P78406 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC13.51□□□□□ -0.25
RAE1P78406 CSH2-202ENST00000345366 598 ntTSL 5 BASIC13.51□□□□□ -0.25
RAE1P78406 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
RAE1P78406 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RAE1P78406 AL391647.1-201ENST00000395664 511 ntBASIC13.51□□□□□ -0.25
RAE1P78406 KRTAP10-13P-201ENST00000412914 571 ntBASIC13.51□□□□□ -0.25
RAE1P78406 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC13.51□□□□□ -0.25
RAE1P78406 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
RAE1P78406 CD164-210ENST00000512821 964 ntTSL 2 BASIC13.51□□□□□ -0.25
RAE1P78406 FAM8A2P-201ENST00000528813 1142 ntBASIC13.51□□□□□ -0.25
RAE1P78406 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC13.51□□□□□ -0.25
RAE1P78406 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC13.51□□□□□ -0.25
RAE1P78406 CSH2-206ENST00000560142 749 ntTSL 5 BASIC13.51□□□□□ -0.25
RAE1P78406 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC13.51□□□□□ -0.25
RAE1P78406 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC13.51□□□□□ -0.25
RAE1P78406 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC13.51□□□□□ -0.25
RAE1P78406 AL132994.2-201ENST00000603120 687 ntBASIC13.51□□□□□ -0.25
RAE1P78406 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC13.51□□□□□ -0.25
RAE1P78406 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RAE1P78406 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
RAE1P78406 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RAE1P78406 PIGV-202ENST00000374145 2713 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
RAE1P78406 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
RAE1P78406 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RAE1P78406 SLC43A3-214ENST00000529554 2207 ntAPPRIS P3 TSL 2 BASIC13.51□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms