Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 SNORD3B-2-202ENST00000571722 791 ntBASIC12.51□□□□□ -0.41
HIST1H3AP68431 RN7SL163P-201ENST00000583100 276 ntBASIC12.51□□□□□ -0.41
HIST1H3AP68431 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC12.51□□□□□ -0.41
HIST1H3AP68431 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC12.51□□□□□ -0.41
HIST1H3AP68431 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC12.51□□□□□ -0.41
HIST1H3AP68431 AC007663.3-201ENST00000609632 465 ntBASIC12.51□□□□□ -0.41
HIST1H3AP68431 GOLGA8IP-202ENST00000611635 2100 ntBASIC12.51□□□□□ -0.41
HIST1H3AP68431 AC005695.3-201ENST00000614522 232 ntBASIC12.51□□□□□ -0.41
HIST1H3AP68431 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC12.51□□□□□ -0.41
HIST1H3AP68431 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
HIST1H3AP68431 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
HIST1H3AP68431 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
HIST1H3AP68431 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
HIST1H3AP68431 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
HIST1H3AP68431 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
HIST1H3AP68431 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
HIST1H3AP68431 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
HIST1H3AP68431 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
HIST1H3AP68431 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC12.51□□□□□ -0.41
HIST1H3AP68431 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC12.51□□□□□ -0.41
HIST1H3AP68431 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
HIST1H3AP68431 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC12.51□□□□□ -0.41
HIST1H3AP68431 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
HIST1H3AP68431 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
HIST1H3AP68431 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC12.51□□□□□ -0.41
HIST1H3AP68431 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
HIST1H3AP68431 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC12.51□□□□□ -0.41
HIST1H3AP68431 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC12.51□□□□□ -0.41
HIST1H3AP68431 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
HIST1H3AP68431 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
HIST1H3AP68431 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
HIST1H3AP68431 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC12.51□□□□□ -0.41
HIST1H3AP68431 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC12.5□□□□□ -0.41
HIST1H3AP68431 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
HIST1H3AP68431 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
HIST1H3AP68431 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
HIST1H3AP68431 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC12.5□□□□□ -0.41
HIST1H3AP68431 SATB2-201ENST00000260926 5318 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
HIST1H3AP68431 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
HIST1H3AP68431 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
HIST1H3AP68431 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
HIST1H3AP68431 AL928654.5-201ENST00000624831 2501 ntBASIC12.5□□□□□ -0.41
HIST1H3AP68431 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
HIST1H3AP68431 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
HIST1H3AP68431 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC12.5□□□□□ -0.41
HIST1H3AP68431 MAPT-IT1-201ENST00000624111 3016 ntBASIC12.5□□□□□ -0.41
HIST1H3AP68431 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC12.5□□□□□ -0.41
HIST1H3AP68431 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
HIST1H3AP68431 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC12.5□□□□□ -0.41
HIST1H3AP68431 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
HIST1H3AP68431 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
HIST1H3AP68431 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC12.5□□□□□ -0.41
HIST1H3AP68431 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
HIST1H3AP68431 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC12.5□□□□□ -0.41
HIST1H3AP68431 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC12.5□□□□□ -0.41
HIST1H3AP68431 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC12.5□□□□□ -0.41
HIST1H3AP68431 FAM8A2P-201ENST00000528813 1142 ntBASIC12.5□□□□□ -0.41
HIST1H3AP68431 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC12.5□□□□□ -0.41
HIST1H3AP68431 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC12.5□□□□□ -0.41
HIST1H3AP68431 MAX-218ENST00000557746 571 ntTSL 4 BASIC12.5□□□□□ -0.41
HIST1H3AP68431 AC104982.3-201ENST00000581995 514 ntBASIC12.5□□□□□ -0.41
HIST1H3AP68431 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC12.5□□□□□ -0.41
HIST1H3AP68431 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC12.5□□□□□ -0.41
HIST1H3AP68431 AC090164.2-201ENST00000611487 516 ntBASIC12.5□□□□□ -0.41
HIST1H3AP68431 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
HIST1H3AP68431 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC12.5□□□□□ -0.41
HIST1H3AP68431 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC12.5□□□□□ -0.41
HIST1H3AP68431 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC12.5□□□□□ -0.41
HIST1H3AP68431 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
HIST1H3AP68431 RPL13AP3-202ENST00000494676 1473 ntBASIC12.5□□□□□ -0.41
HIST1H3AP68431 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
HIST1H3AP68431 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
HIST1H3AP68431 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC12.5□□□□□ -0.41
HIST1H3AP68431 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
HIST1H3AP68431 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC12.5□□□□□ -0.41
HIST1H3AP68431 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC12.5□□□□□ -0.41
HIST1H3AP68431 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
HIST1H3AP68431 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC12.5□□□□□ -0.41
HIST1H3AP68431 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC12.5□□□□□ -0.41
HIST1H3AP68431 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC12.5□□□□□ -0.41
HIST1H3AP68431 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
HIST1H3AP68431 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
HIST1H3AP68431 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
HIST1H3AP68431 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
HIST1H3AP68431 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC12.49□□□□□ -0.41
HIST1H3AP68431 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
HIST1H3AP68431 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
HIST1H3AP68431 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
HIST1H3AP68431 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
HIST1H3AP68431 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
HIST1H3AP68431 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC12.49□□□□□ -0.41
HIST1H3AP68431 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
HIST1H3AP68431 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC12.49□□□□□ -0.41
HIST1H3AP68431 AC015909.5-201ENST00000624336 2266 ntBASIC12.49□□□□□ -0.41
HIST1H3AP68431 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
HIST1H3AP68431 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
HIST1H3AP68431 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
HIST1H3AP68431 FBN3-207ENST00000601739 9086 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
HIST1H3AP68431 MARK2P9-201ENST00000430958 1727 ntBASIC12.49□□□□□ -0.41
HIST1H3AP68431 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC12.49□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms