Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 AC079781.5-202ENST00000641784 3743 ntBASIC12.94□□□□□ -0.34
APOBEC1P41238 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
APOBEC1P41238 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
APOBEC1P41238 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC12.94□□□□□ -0.34
APOBEC1P41238 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
APOBEC1P41238 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
APOBEC1P41238 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
APOBEC1P41238 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
APOBEC1P41238 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
APOBEC1P41238 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
APOBEC1P41238 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
APOBEC1P41238 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
APOBEC1P41238 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
APOBEC1P41238 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
APOBEC1P41238 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
APOBEC1P41238 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
APOBEC1P41238 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
APOBEC1P41238 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
APOBEC1P41238 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC12.93□□□□□ -0.34
APOBEC1P41238 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
APOBEC1P41238 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
APOBEC1P41238 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
APOBEC1P41238 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
APOBEC1P41238 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC12.93□□□□□ -0.34
APOBEC1P41238 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
APOBEC1P41238 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
APOBEC1P41238 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC12.93□□□□□ -0.34
APOBEC1P41238 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
APOBEC1P41238 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
APOBEC1P41238 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
APOBEC1P41238 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC12.93□□□□□ -0.34
APOBEC1P41238 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
APOBEC1P41238 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
APOBEC1P41238 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
APOBEC1P41238 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
APOBEC1P41238 AGER-203ENST00000375065 665 ntTSL 2 BASIC12.93□□□□□ -0.34
APOBEC1P41238 NCR3-202ENST00000376071 541 ntTSL 5 BASIC12.93□□□□□ -0.34
APOBEC1P41238 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
APOBEC1P41238 CRCP-204ENST00000398684 492 ntTSL 2 BASIC12.93□□□□□ -0.34
APOBEC1P41238 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
APOBEC1P41238 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
APOBEC1P41238 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC12.93□□□□□ -0.34
APOBEC1P41238 KRT8P13-201ENST00000463294 1010 ntBASIC12.93□□□□□ -0.34
APOBEC1P41238 ARTN-209ENST00000479128 471 ntTSL 3 BASIC12.93□□□□□ -0.34
APOBEC1P41238 RN7SL530P-201ENST00000485097 298 ntBASIC12.93□□□□□ -0.34
APOBEC1P41238 RHEB-207ENST00000496004 744 ntTSL 2 BASIC12.93□□□□□ -0.34
APOBEC1P41238 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC12.93□□□□□ -0.34
APOBEC1P41238 MAX-218ENST00000557746 571 ntTSL 4 BASIC12.93□□□□□ -0.34
APOBEC1P41238 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC12.93□□□□□ -0.34
APOBEC1P41238 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC12.93□□□□□ -0.34
APOBEC1P41238 MIR4538-201ENST00000581377 78 ntBASIC12.93□□□□□ -0.34
APOBEC1P41238 KRT18P8-201ENST00000581937 1246 ntBASIC12.93□□□□□ -0.34
APOBEC1P41238 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC12.93□□□□□ -0.34
APOBEC1P41238 KC6-205ENST00000599934 556 ntTSL 4 BASIC12.93□□□□□ -0.34
APOBEC1P41238 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC12.93□□□□□ -0.34
APOBEC1P41238 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
APOBEC1P41238 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC12.93□□□□□ -0.34
APOBEC1P41238 AC126335.2-201ENST00000623362 4637 ntBASIC12.93□□□□□ -0.34
APOBEC1P41238 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
APOBEC1P41238 USP39-207ENST00000450066 2086 ntTSL 2 BASIC12.93□□□□□ -0.34
APOBEC1P41238 AL031595.1-201ENST00000623969 4709 ntBASIC12.93□□□□□ -0.34
APOBEC1P41238 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
APOBEC1P41238 CNTNAP3P2-201ENST00000617175 3861 ntBASIC12.93□□□□□ -0.34
APOBEC1P41238 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC12.93□□□□□ -0.34
APOBEC1P41238 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
APOBEC1P41238 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
APOBEC1P41238 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
APOBEC1P41238 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC12.93□□□□□ -0.34
APOBEC1P41238 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC12.93□□□□□ -0.34
APOBEC1P41238 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
APOBEC1P41238 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC12.93□□□□□ -0.34
APOBEC1P41238 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
APOBEC1P41238 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
APOBEC1P41238 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
APOBEC1P41238 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
APOBEC1P41238 DKFZP434A062-201ENST00000573103 5021 ntBASIC12.93□□□□□ -0.34
APOBEC1P41238 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
APOBEC1P41238 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
APOBEC1P41238 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
APOBEC1P41238 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
APOBEC1P41238 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
APOBEC1P41238 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC12.92□□□□□ -0.34
APOBEC1P41238 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
APOBEC1P41238 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC12.92□□□□□ -0.34
APOBEC1P41238 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
APOBEC1P41238 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC12.92□□□□□ -0.34
APOBEC1P41238 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
APOBEC1P41238 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
APOBEC1P41238 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
APOBEC1P41238 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
APOBEC1P41238 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
APOBEC1P41238 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC12.92□□□□□ -0.34
APOBEC1P41238 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
APOBEC1P41238 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
APOBEC1P41238 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC12.92□□□□□ -0.34
APOBEC1P41238 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
APOBEC1P41238 HNRNPA1P41-201ENST00000397777 928 ntBASIC12.92□□□□□ -0.34
APOBEC1P41238 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC12.92□□□□□ -0.34
APOBEC1P41238 AK2P2-201ENST00000439142 405 ntBASIC12.92□□□□□ -0.34
APOBEC1P41238 GOLGA2P8-201ENST00000505201 779 ntBASIC12.92□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms