Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
COL15A1P39059 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC17.81■□□□□ 0.44
COL15A1P39059 SPAAR-203ENST00000636776 1538 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
COL15A1P39059 MED7-202ENST00000420343 1382 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
COL15A1P39059 FKBP4P8-201ENST00000610931 1369 ntBASIC17.81■□□□□ 0.44
COL15A1P39059 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC17.81■□□□□ 0.44
COL15A1P39059 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
COL15A1P39059 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC17.8■□□□□ 0.44
COL15A1P39059 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
COL15A1P39059 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
COL15A1P39059 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
COL15A1P39059 GALP-201ENST00000357330 938 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
COL15A1P39059 CDKN2C-202ENST00000371761 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
COL15A1P39059 LST1-204ENST00000376086 554 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
COL15A1P39059 ZNF286A-201ENST00000395893 654 ntTSL 3 BASIC17.8■□□□□ 0.44
COL15A1P39059 MPP6-202ENST00000396475 3848 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
COL15A1P39059 GALP-202ENST00000440823 889 ntTSL 5 BASIC17.8■□□□□ 0.44
COL15A1P39059 AL157392.3-204ENST00000440878 397 ntTSL 3 BASIC17.8■□□□□ 0.44
COL15A1P39059 TAGLN3-203ENST00000455401 1164 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
COL15A1P39059 FAM3D-AS1-201ENST00000464125 821 ntTSL 3 BASIC17.8■□□□□ 0.44
COL15A1P39059 RN7SL147P-201ENST00000487345 298 ntBASIC17.8■□□□□ 0.44
COL15A1P39059 RN7SL288P-201ENST00000490496 291 ntBASIC17.8■□□□□ 0.44
COL15A1P39059 AC087203.1-201ENST00000532111 1181 ntBASIC17.8■□□□□ 0.44
COL15A1P39059 RARS-210ENST00000626454 177 ntTSL 5 BASIC17.8■□□□□ 0.44
COL15A1P39059 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
COL15A1P39059 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
COL15A1P39059 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
COL15A1P39059 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
COL15A1P39059 CLEC20A-202ENST00000623247 1491 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
COL15A1P39059 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC17.8■□□□□ 0.44
COL15A1P39059 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC17.8■□□□□ 0.44
COL15A1P39059 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
COL15A1P39059 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
COL15A1P39059 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
COL15A1P39059 TCAM1P-207ENST00000485295 1537 ntBASIC17.8■□□□□ 0.44
COL15A1P39059 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
COL15A1P39059 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
COL15A1P39059 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
COL15A1P39059 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
COL15A1P39059 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
COL15A1P39059 HPSE2-206ENST00000628193 1760 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
COL15A1P39059 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
COL15A1P39059 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
COL15A1P39059 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
COL15A1P39059 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
COL15A1P39059 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
COL15A1P39059 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC17.8■□□□□ 0.44
COL15A1P39059 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
COL15A1P39059 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
COL15A1P39059 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC17.8■□□□□ 0.44
COL15A1P39059 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
COL15A1P39059 MRPL33-201ENST00000296102 518 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
COL15A1P39059 ATP5S-203ENST00000358473 801 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
COL15A1P39059 SSR4-202ENST00000370085 526 ntTSL 2 BASIC17.79■□□□□ 0.44
COL15A1P39059 MRPL33-202ENST00000379666 404 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
COL15A1P39059 FAM21EP-201ENST00000417804 985 ntBASIC17.79■□□□□ 0.44
COL15A1P39059 AL451000.1-201ENST00000451300 1186 ntBASIC17.79■□□□□ 0.44
COL15A1P39059 LINC00313-207ENST00000451543 413 ntTSL 3 BASIC17.79■□□□□ 0.44
COL15A1P39059 MUSTN1-202ENST00000486659 622 ntTSL 2 BASIC17.79■□□□□ 0.44
COL15A1P39059 CASP3-205ENST00000517513 964 ntTSL 5 BASIC17.79■□□□□ 0.44
COL15A1P39059 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC17.79■□□□□ 0.44
COL15A1P39059 ZNF576-205ENST00000529930 830 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
COL15A1P39059 EHF-208ENST00000530286 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
COL15A1P39059 ALG10B-203ENST00000551464 571 ntTSL 3 BASIC17.79■□□□□ 0.44
COL15A1P39059 AC074050.2-201ENST00000563338 538 ntTSL 3 BASIC17.79■□□□□ 0.44
COL15A1P39059 AL049840.2-201ENST00000602722 535 ntBASIC17.79■□□□□ 0.44
COL15A1P39059 LINC01669-201ENST00000623161 413 ntTSL 3 BASIC17.79■□□□□ 0.44
COL15A1P39059 ADAMTS9-AS1-216ENST00000626280 882 ntTSL 5 BASIC17.79■□□□□ 0.44
COL15A1P39059 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC17.79■□□□□ 0.44
COL15A1P39059 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
COL15A1P39059 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
COL15A1P39059 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
COL15A1P39059 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
COL15A1P39059 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
COL15A1P39059 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC17.79■□□□□ 0.44
COL15A1P39059 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
COL15A1P39059 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC17.79■□□□□ 0.44
COL15A1P39059 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC17.79■□□□□ 0.44
COL15A1P39059 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC17.79■□□□□ 0.44
COL15A1P39059 BBS1-203ENST00000455748 1552 ntTSL 2 BASIC17.79■□□□□ 0.44
COL15A1P39059 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
COL15A1P39059 HTR3E-205ENST00000436361 1371 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
COL15A1P39059 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
COL15A1P39059 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
COL15A1P39059 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
COL15A1P39059 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
COL15A1P39059 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC17.79■□□□□ 0.44
COL15A1P39059 SLC47A1-206ENST00000571335 1415 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
COL15A1P39059 PGD-201ENST00000270776 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
COL15A1P39059 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
COL15A1P39059 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
COL15A1P39059 RFX8-201ENST00000428343 1686 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
COL15A1P39059 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
COL15A1P39059 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
COL15A1P39059 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
COL15A1P39059 NSMCE1-201ENST00000361439 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
COL15A1P39059 AC022080.1-201ENST00000366255 781 ntBASIC17.79■□□□□ 0.44
COL15A1P39059 G0S2-201ENST00000367029 866 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
COL15A1P39059 FAM27E5-201ENST00000426869 682 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
COL15A1P39059 HNRNPA1P2-207ENST00000432375 960 ntBASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms