Protein–RNA interactions for Protein: P36941

LTBR, Tumor necrosis factor receptor superfamily member 3, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBRP36941 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC14.37□□□□□ -0.11
LTBRP36941 NR1I3-225ENST00000508387 634 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
LTBRP36941 AP003168.2-201ENST00000531215 471 ntTSL 3 BASIC14.37□□□□□ -0.11
LTBRP36941 AL445363.2-201ENST00000554608 837 ntTSL 2 BASIC14.37□□□□□ -0.11
LTBRP36941 AC090907.2-201ENST00000559857 720 ntTSL 3 BASIC14.37□□□□□ -0.11
LTBRP36941 AC090617.4-201ENST00000572404 422 ntTSL 3 BASIC14.37□□□□□ -0.11
LTBRP36941 AC087072.1-201ENST00000603727 421 ntBASIC14.37□□□□□ -0.11
LTBRP36941 MIR6893-201ENST00000613458 69 ntBASIC14.37□□□□□ -0.11
LTBRP36941 CRABP2-204ENST00000621784 1033 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
LTBRP36941 AL445363.1-201ENST00000623749 952 ntTSL 2 BASIC14.37□□□□□ -0.11
LTBRP36941 LINC00969-253ENST00000625338 804 ntTSL 5 BASIC14.37□□□□□ -0.11
LTBRP36941 AL590094.1-208ENST00000636917 627 ntTSL 5 BASIC14.37□□□□□ -0.11
LTBRP36941 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
LTBRP36941 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC14.37□□□□□ -0.11
LTBRP36941 PTN-202ENST00000393083 1599 ntTSL 5 BASIC14.37□□□□□ -0.11
LTBRP36941 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
LTBRP36941 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC14.37□□□□□ -0.11
LTBRP36941 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
LTBRP36941 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LTBRP36941 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LTBRP36941 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
LTBRP36941 DAP3-201ENST00000343043 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LTBRP36941 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
LTBRP36941 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC14.37□□□□□ -0.11
LTBRP36941 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LTBRP36941 GGA1-201ENST00000325180 2528 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
LTBRP36941 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
LTBRP36941 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
LTBRP36941 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
LTBRP36941 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LTBRP36941 CLEC10A-206ENST00000576617 1800 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
LTBRP36941 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LTBRP36941 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC14.36□□□□□ -0.11
LTBRP36941 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
LTBRP36941 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LTBRP36941 C17orf80-202ENST00000268942 3449 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
LTBRP36941 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
LTBRP36941 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LTBRP36941 CROCCP1-201ENST00000426910 5675 ntBASIC14.36□□□□□ -0.11
LTBRP36941 ZSCAN2-202ENST00000327179 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LTBRP36941 RNF181-201ENST00000306368 569 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
LTBRP36941 OR2W3-201ENST00000360358 945 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
LTBRP36941 KRTAP1-5-201ENST00000361883 1177 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
LTBRP36941 SH3BGR-202ENST00000380631 780 ntTSL 5 BASIC14.36□□□□□ -0.11
LTBRP36941 ATP5J-204ENST00000400093 1179 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LTBRP36941 INMT-202ENST00000409539 803 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LTBRP36941 TISP43-202ENST00000409982 1039 ntAPPRIS P5 TSL 1 (best) BASIC14.36□□□□□ -0.11
LTBRP36941 RPSAP6-201ENST00000417882 882 ntBASIC14.36□□□□□ -0.11
LTBRP36941 AC010997.2-201ENST00000427610 260 ntTSL 3 BASIC14.36□□□□□ -0.11
LTBRP36941 RPL18AP15-201ENST00000430258 517 ntBASIC14.36□□□□□ -0.11
LTBRP36941 RNF181-203ENST00000441634 844 ntAPPRIS ALT1 TSL 2 BASIC14.36□□□□□ -0.11
LTBRP36941 CDKN2A-AS1-201ENST00000441769 823 ntBASIC14.36□□□□□ -0.11
LTBRP36941 AC011995.2-201ENST00000452701 574 ntTSL 4 BASIC14.36□□□□□ -0.11
LTBRP36941 FAM86JP-202ENST00000484500 988 ntBASIC14.36□□□□□ -0.11
LTBRP36941 CHIC2-204ENST00000512964 711 ntTSL 5 BASIC14.36□□□□□ -0.11
LTBRP36941 OR52V1P-201ENST00000515557 898 ntBASIC14.36□□□□□ -0.11
LTBRP36941 RNA5SP288-201ENST00000516075 93 ntBASIC14.36□□□□□ -0.11
LTBRP36941 IDH3A-213ENST00000559205 566 ntTSL 4 BASIC14.36□□□□□ -0.11
LTBRP36941 PCTP-206ENST00000573500 919 ntTSL 3 BASIC14.36□□□□□ -0.11
LTBRP36941 AC012617.1-202ENST00000586488 509 ntTSL 2 BASIC14.36□□□□□ -0.11
LTBRP36941 ECSIT-211ENST00000592312 1286 ntTSL 5 BASIC14.36□□□□□ -0.11
LTBRP36941 RPS5-205ENST00000598495 800 ntTSL 3 BASIC14.36□□□□□ -0.11
LTBRP36941 AL035427.1-201ENST00000602441 387 ntTSL 3 BASIC14.36□□□□□ -0.11
LTBRP36941 OR3A1-202ENST00000615105 966 ntBASIC14.36□□□□□ -0.11
LTBRP36941 ZFAS1-208ENST00000618800 597 ntTSL 3 BASIC14.36□□□□□ -0.11
LTBRP36941 Metazoa_SRP.153-201ENST00000620153 341 ntBASIC14.36□□□□□ -0.11
LTBRP36941 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
LTBRP36941 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
LTBRP36941 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
LTBRP36941 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LTBRP36941 DBET-201ENST00000630918 3363 ntBASIC14.36□□□□□ -0.11
LTBRP36941 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
LTBRP36941 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC14.35□□□□□ -0.11
LTBRP36941 DSTN-203ENST00000474024 1853 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
LTBRP36941 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
LTBRP36941 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC14.35□□□□□ -0.11
LTBRP36941 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LTBRP36941 PROZ-201ENST00000342783 1551 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
LTBRP36941 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LTBRP36941 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC14.35□□□□□ -0.11
LTBRP36941 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
LTBRP36941 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
LTBRP36941 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
LTBRP36941 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC14.35□□□□□ -0.11
LTBRP36941 TRO-225ENST00000622017 1403 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
LTBRP36941 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
LTBRP36941 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LTBRP36941 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LTBRP36941 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC14.35□□□□□ -0.11
LTBRP36941 ZNF143-202ENST00000396597 1954 ntTSL 2 BASIC14.35□□□□□ -0.11
LTBRP36941 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
LTBRP36941 CCNE2-201ENST00000308108 2724 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
LTBRP36941 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
LTBRP36941 OR6S1-201ENST00000320704 996 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
LTBRP36941 TUBB2BP1-201ENST00000404155 871 ntBASIC14.35□□□□□ -0.11
LTBRP36941 AC007383.2-201ENST00000420509 752 ntTSL 2 BASIC14.35□□□□□ -0.11
LTBRP36941 HLA-W-207ENST00000439514 771 ntBASIC14.35□□□□□ -0.11
LTBRP36941 RPL38-202ENST00000439590 431 ntAPPRIS P2 TSL 2 BASIC14.35□□□□□ -0.11
LTBRP36941 PRR34-AS1-203ENST00000451166 877 ntTSL 3 BASIC14.35□□□□□ -0.11
LTBRP36941 AL353653.1-201ENST00000452336 638 ntTSL 2 BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 67 ms