Protein–RNA interactions for Protein: P36406

TRIM23, E3 ubiquitin-protein ligase TRIM23, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23P36406 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TRIM23P36406 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
TRIM23P36406 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRIM23P36406 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRIM23P36406 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRIM23P36406 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRIM23P36406 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRIM23P36406 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRIM23P36406 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRIM23P36406 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRIM23P36406 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRIM23P36406 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRIM23P36406 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRIM23P36406 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
TRIM23P36406 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC14.02□□□□□ -0.16
TRIM23P36406 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC14.02□□□□□ -0.16
TRIM23P36406 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
TRIM23P36406 FUBP1-203ENST00000370768 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRIM23P36406 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
TRIM23P36406 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRIM23P36406 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
TRIM23P36406 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRIM23P36406 GRK6P1-201ENST00000400595 1711 ntBASIC14.02□□□□□ -0.16
TRIM23P36406 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
TRIM23P36406 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC14.02□□□□□ -0.16
TRIM23P36406 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC14.02□□□□□ -0.17
TRIM23P36406 AL590824.1-201ENST00000403828 1349 ntBASIC14.02□□□□□ -0.17
TRIM23P36406 TEKT4P2-202ENST00000559466 1312 ntBASIC14.02□□□□□ -0.17
TRIM23P36406 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRIM23P36406 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRIM23P36406 CST5-201ENST00000304710 756 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRIM23P36406 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
TRIM23P36406 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRIM23P36406 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC14.02□□□□□ -0.17
TRIM23P36406 RN7SL181P-201ENST00000462921 277 ntBASIC14.02□□□□□ -0.17
TRIM23P36406 AC093627.2-201ENST00000497017 568 ntTSL 4 BASIC14.02□□□□□ -0.17
TRIM23P36406 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC14.02□□□□□ -0.17
TRIM23P36406 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC14.02□□□□□ -0.17
TRIM23P36406 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
TRIM23P36406 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC14.02□□□□□ -0.17
TRIM23P36406 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC14.02□□□□□ -0.17
TRIM23P36406 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRIM23P36406 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC14.02□□□□□ -0.17
TRIM23P36406 AC117489.1-201ENST00000625169 3217 ntBASIC14.02□□□□□ -0.17
TRIM23P36406 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
TRIM23P36406 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRIM23P36406 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC14.02□□□□□ -0.17
TRIM23P36406 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRIM23P36406 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
TRIM23P36406 OR2I1P-209ENST00000641730 5365 ntBASIC14.02□□□□□ -0.17
TRIM23P36406 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
TRIM23P36406 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
TRIM23P36406 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC14.02□□□□□ -0.17
TRIM23P36406 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRIM23P36406 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC14.02□□□□□ -0.17
TRIM23P36406 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
TRIM23P36406 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
TRIM23P36406 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC14.02□□□□□ -0.17
TRIM23P36406 API5-208ENST00000531273 1868 ntTSL 2 BASIC14.01□□□□□ -0.17
TRIM23P36406 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRIM23P36406 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRIM23P36406 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRIM23P36406 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
TRIM23P36406 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRIM23P36406 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRIM23P36406 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRIM23P36406 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRIM23P36406 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRIM23P36406 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRIM23P36406 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC14.01□□□□□ -0.17
TRIM23P36406 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TRIM23P36406 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TRIM23P36406 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRIM23P36406 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRIM23P36406 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRIM23P36406 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRIM23P36406 CST9L-201ENST00000376979 959 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRIM23P36406 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRIM23P36406 FXNP2-201ENST00000411625 547 ntBASIC14.01□□□□□ -0.17
TRIM23P36406 DNAJB1P1-201ENST00000429417 1024 ntBASIC14.01□□□□□ -0.17
TRIM23P36406 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC14.01□□□□□ -0.17
TRIM23P36406 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
TRIM23P36406 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC14.01□□□□□ -0.17
TRIM23P36406 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC14.01□□□□□ -0.17
TRIM23P36406 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRIM23P36406 AP002803.1-201ENST00000528836 498 ntBASIC14.01□□□□□ -0.17
TRIM23P36406 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRIM23P36406 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC14.01□□□□□ -0.17
TRIM23P36406 LINC01584-201ENST00000562495 676 ntTSL 5 BASIC14.01□□□□□ -0.17
TRIM23P36406 CMC2-204ENST00000562713 573 ntTSL 3 BASIC14.01□□□□□ -0.17
TRIM23P36406 CMC2-209ENST00000565108 399 ntTSL 2 BASIC14.01□□□□□ -0.17
TRIM23P36406 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC14.01□□□□□ -0.17
TRIM23P36406 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC14.01□□□□□ -0.17
TRIM23P36406 AC087045.2-201ENST00000606279 1003 ntBASIC14.01□□□□□ -0.17
TRIM23P36406 MIR6842-201ENST00000612539 65 ntBASIC14.01□□□□□ -0.17
TRIM23P36406 AC084781.1-201ENST00000613737 656 ntBASIC14.01□□□□□ -0.17
TRIM23P36406 COX6A1P2-201ENST00000620597 330 ntBASIC14.01□□□□□ -0.17
TRIM23P36406 IFI27-215ENST00000621160 644 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRIM23P36406 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRIM23P36406 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms