Protein–RNA interactions for Protein: P07951

TPM2, Tropomyosin beta chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM2P07951 AC092364.2-202ENST00000597012 1073 ntBASIC16.4■□□□□ 0.22
TPM2P07951 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC16.4■□□□□ 0.22
TPM2P07951 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC16.4■□□□□ 0.22
TPM2P07951 ZMYND10-201ENST00000231749 2896 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
TPM2P07951 SH2D5-201ENST00000375031 3705 ntTSL 2 BASIC16.4■□□□□ 0.22
TPM2P07951 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TPM2P07951 ADGRG6-202ENST00000296932 6849 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TPM2P07951 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC16.4■□□□□ 0.22
TPM2P07951 SON-203ENST00000381679 7860 ntTSL 5 BASIC16.4■□□□□ 0.22
TPM2P07951 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TPM2P07951 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
TPM2P07951 UBE3A-228ENST00000638155 9131 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
TPM2P07951 NAGK-202ENST00000418807 2343 ntTSL 5 BASIC16.4■□□□□ 0.22
TPM2P07951 CYTH1-203ENST00000585509 3315 ntTSL 5 BASIC16.4■□□□□ 0.22
TPM2P07951 KCNJ9-201ENST00000368088 4170 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TPM2P07951 AFF1-201ENST00000307808 9390 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
TPM2P07951 ADGRG6-204ENST00000367609 6887 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
TPM2P07951 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC16.4■□□□□ 0.22
TPM2P07951 TRMT61A-202ENST00000389749 3229 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TPM2P07951 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TPM2P07951 CYB561D1-206ENST00000496961 3424 ntTSL 2 BASIC16.39■□□□□ 0.22
TPM2P07951 CDC20B-203ENST00000381375 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.22
TPM2P07951 PSME4-202ENST00000404125 7099 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TPM2P07951 TNK1-201ENST00000570896 3122 ntAPPRIS P3 TSL 5 BASIC16.39■□□□□ 0.21
TPM2P07951 SERPINI1-201ENST00000295777 1907 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TPM2P07951 SGK2-203ENST00000373092 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TPM2P07951 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
TPM2P07951 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC16.39■□□□□ 0.21
TPM2P07951 CCBE1-201ENST00000398179 5979 ntTSL 5 BASIC16.39■□□□□ 0.21
TPM2P07951 AC125807.2-201ENST00000513358 3514 ntBASIC16.39■□□□□ 0.21
TPM2P07951 IKBKE-201ENST00000578328 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
TPM2P07951 CPN2-201ENST00000323830 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TPM2P07951 WTH3DI-201ENST00000623617 3032 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
TPM2P07951 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TPM2P07951 ADAM8-201ENST00000415217 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
TPM2P07951 MDM1-205ENST00000430606 2170 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TPM2P07951 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TPM2P07951 RNU1-114P-201ENST00000365297 166 ntBASIC16.39■□□□□ 0.21
TPM2P07951 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC16.39■□□□□ 0.21
TPM2P07951 CD81-207ENST00000481687 890 ntTSL 2 BASIC16.39■□□□□ 0.21
TPM2P07951 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC16.39■□□□□ 0.21
TPM2P07951 AC093214.1-201ENST00000511688 1107 ntBASIC16.39■□□□□ 0.21
TPM2P07951 FADS2-205ENST00000517839 469 ntTSL 3 BASIC16.39■□□□□ 0.21
TPM2P07951 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
TPM2P07951 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC16.39■□□□□ 0.21
TPM2P07951 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC16.39■□□□□ 0.21
TPM2P07951 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC16.39■□□□□ 0.21
TPM2P07951 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
TPM2P07951 AC099568.2-201ENST00000609194 695 ntBASIC16.39■□□□□ 0.21
TPM2P07951 AC023511.2-201ENST00000618803 211 ntBASIC16.39■□□□□ 0.21
TPM2P07951 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC16.39■□□□□ 0.21
TPM2P07951 FLT4-201ENST00000261937 5857 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TPM2P07951 KLHL13-209ENST00000545703 3322 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TPM2P07951 HSPA2-201ENST00000247207 2767 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
TPM2P07951 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC16.39■□□□□ 0.21
TPM2P07951 TNNI1-207ENST00000622580 6142 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TPM2P07951 LINC02015-202ENST00000436078 2957 ntTSL 2 BASIC16.39■□□□□ 0.21
TPM2P07951 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TPM2P07951 TMEM41A-203ENST00000421852 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TPM2P07951 AMT-232ENST00000636199 1546 ntTSL 5 BASIC16.39■□□□□ 0.21
TPM2P07951 NPC1-201ENST00000269228 5157 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TPM2P07951 DTX1-201ENST00000257600 3455 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TPM2P07951 NRXN1-259ENST00000637511 3651 ntTSL 5 BASIC16.39■□□□□ 0.21
TPM2P07951 LMBRD2-201ENST00000296603 8185 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TPM2P07951 GBF1-201ENST00000369983 6403 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TPM2P07951 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TPM2P07951 LINC00846-201ENST00000334165 1778 ntTSL 2 BASIC16.38■□□□□ 0.21
TPM2P07951 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC16.38■□□□□ 0.21
TPM2P07951 ARFIP2-210ENST00000614314 3846 ntTSL 2 BASIC16.38■□□□□ 0.21
TPM2P07951 MKNK1-201ENST00000341183 2612 ntTSL 5 BASIC16.38■□□□□ 0.21
TPM2P07951 DDC-213ENST00000617822 1809 ntTSL 3 BASIC16.38■□□□□ 0.21
TPM2P07951 KRT33B-201ENST00000251646 1607 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TPM2P07951 PFKM-201ENST00000312352 3078 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TPM2P07951 FLNC-202ENST00000346177 9042 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TPM2P07951 RGS3-205ENST00000374134 2862 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TPM2P07951 SRGAP3-201ENST00000360413 8415 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TPM2P07951 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TPM2P07951 PER3-209ENST00000614998 6261 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
TPM2P07951 LPCAT1-201ENST00000283415 3966 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TPM2P07951 MAD1L1-201ENST00000265854 2718 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TPM2P07951 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
TPM2P07951 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
TPM2P07951 TVP23A-201ENST00000299866 3360 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
TPM2P07951 INTS13-201ENST00000261191 2974 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TPM2P07951 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TPM2P07951 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC16.38■□□□□ 0.21
TPM2P07951 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
TPM2P07951 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC16.38■□□□□ 0.21
TPM2P07951 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
TPM2P07951 KLF2P2-201ENST00000416807 1039 ntBASIC16.38■□□□□ 0.21
TPM2P07951 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC16.38■□□□□ 0.21
TPM2P07951 AC026434.2-201ENST00000506094 1078 ntBASIC16.38■□□□□ 0.21
TPM2P07951 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TPM2P07951 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC16.38■□□□□ 0.21
TPM2P07951 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC16.38■□□□□ 0.21
TPM2P07951 TUBB8P7-202ENST00000564451 2115 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TPM2P07951 AC093726.1-201ENST00000608064 963 ntBASIC16.38■□□□□ 0.21
TPM2P07951 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC16.38■□□□□ 0.21
TPM2P07951 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TPM2P07951 PTPRH-202ENST00000376350 3877 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms