Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.31
NPIPA2E9PIF3 AC007191.1-201ENST00000623179 2995 ntBASIC13.08□□□□□ -0.31
NPIPA2E9PIF3 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
NPIPA2E9PIF3 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.31
NPIPA2E9PIF3 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
NPIPA2E9PIF3 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
NPIPA2E9PIF3 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
NPIPA2E9PIF3 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
NPIPA2E9PIF3 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC13.08□□□□□ -0.31
NPIPA2E9PIF3 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC13.08□□□□□ -0.31
NPIPA2E9PIF3 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
NPIPA2E9PIF3 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
NPIPA2E9PIF3 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
NPIPA2E9PIF3 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC13.08□□□□□ -0.32
NPIPA2E9PIF3 AC023908.3-201ENST00000564211 3047 ntBASIC13.08□□□□□ -0.32
NPIPA2E9PIF3 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
NPIPA2E9PIF3 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
NPIPA2E9PIF3 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC13.08□□□□□ -0.32
NPIPA2E9PIF3 ABCC10-204ENST00000372530 5033 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
NPIPA2E9PIF3 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
NPIPA2E9PIF3 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC13.08□□□□□ -0.32
NPIPA2E9PIF3 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
NPIPA2E9PIF3 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
NPIPA2E9PIF3 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC13.08□□□□□ -0.32
NPIPA2E9PIF3 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
NPIPA2E9PIF3 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
NPIPA2E9PIF3 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
NPIPA2E9PIF3 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
NPIPA2E9PIF3 OR2K2-202ENST00000374428 1038 ntBASIC13.08□□□□□ -0.32
NPIPA2E9PIF3 AL627231.1-201ENST00000394467 1125 ntBASIC13.08□□□□□ -0.32
NPIPA2E9PIF3 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC13.08□□□□□ -0.32
NPIPA2E9PIF3 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC13.08□□□□□ -0.32
NPIPA2E9PIF3 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC13.08□□□□□ -0.32
NPIPA2E9PIF3 TSPY25P-201ENST00000429463 745 ntBASIC13.08□□□□□ -0.32
NPIPA2E9PIF3 RPL8P2-201ENST00000430538 502 ntBASIC13.08□□□□□ -0.32
NPIPA2E9PIF3 FGFR3P1-201ENST00000449999 601 ntBASIC13.08□□□□□ -0.32
NPIPA2E9PIF3 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
NPIPA2E9PIF3 AC019193.1-201ENST00000506678 823 ntBASIC13.08□□□□□ -0.32
NPIPA2E9PIF3 CFL1-214ENST00000534769 758 ntTSL 2 BASIC13.08□□□□□ -0.32
NPIPA2E9PIF3 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC13.08□□□□□ -0.32
NPIPA2E9PIF3 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
NPIPA2E9PIF3 AC027237.1-201ENST00000560942 655 ntBASIC13.08□□□□□ -0.32
NPIPA2E9PIF3 STUB1-204ENST00000564370 875 ntTSL 2 BASIC13.08□□□□□ -0.32
NPIPA2E9PIF3 AC026803.1-201ENST00000569130 274 ntBASIC13.08□□□□□ -0.32
NPIPA2E9PIF3 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC13.08□□□□□ -0.32
NPIPA2E9PIF3 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC13.08□□□□□ -0.32
NPIPA2E9PIF3 LINC01783-202ENST00000614408 828 ntBASIC13.08□□□□□ -0.32
NPIPA2E9PIF3 BX284668.2-205ENST00000619677 828 ntBASIC13.08□□□□□ -0.32
NPIPA2E9PIF3 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
NPIPA2E9PIF3 LINC01165-201ENST00000445190 1623 ntBASIC13.08□□□□□ -0.32
NPIPA2E9PIF3 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
NPIPA2E9PIF3 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC13.08□□□□□ -0.32
NPIPA2E9PIF3 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC13.08□□□□□ -0.32
NPIPA2E9PIF3 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC13.08□□□□□ -0.32
NPIPA2E9PIF3 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC13.08□□□□□ -0.32
NPIPA2E9PIF3 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
NPIPA2E9PIF3 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
NPIPA2E9PIF3 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC13.08□□□□□ -0.32
NPIPA2E9PIF3 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC13.08□□□□□ -0.32
NPIPA2E9PIF3 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
NPIPA2E9PIF3 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
NPIPA2E9PIF3 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
NPIPA2E9PIF3 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
NPIPA2E9PIF3 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
NPIPA2E9PIF3 HIC2-203ENST00000443632 6940 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
NPIPA2E9PIF3 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
NPIPA2E9PIF3 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC13.08□□□□□ -0.32
NPIPA2E9PIF3 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC13.08□□□□□ -0.32
NPIPA2E9PIF3 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
NPIPA2E9PIF3 FAM90A2P-201ENST00000511144 1395 ntBASIC13.07□□□□□ -0.32
NPIPA2E9PIF3 FAM90A25P-201ENST00000528404 1395 ntBASIC13.07□□□□□ -0.32
NPIPA2E9PIF3 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
NPIPA2E9PIF3 CAP2P1-201ENST00000557743 1390 ntBASIC13.07□□□□□ -0.32
NPIPA2E9PIF3 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
NPIPA2E9PIF3 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
NPIPA2E9PIF3 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
NPIPA2E9PIF3 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC13.07□□□□□ -0.32
NPIPA2E9PIF3 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
NPIPA2E9PIF3 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
NPIPA2E9PIF3 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
NPIPA2E9PIF3 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
NPIPA2E9PIF3 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
NPIPA2E9PIF3 AC005089.1-201ENST00000619486 2241 ntBASIC13.07□□□□□ -0.32
NPIPA2E9PIF3 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC13.07□□□□□ -0.32
NPIPA2E9PIF3 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
NPIPA2E9PIF3 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
NPIPA2E9PIF3 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
NPIPA2E9PIF3 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
NPIPA2E9PIF3 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
NPIPA2E9PIF3 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
NPIPA2E9PIF3 KRT18P36-201ENST00000411618 1276 ntBASIC13.07□□□□□ -0.32
NPIPA2E9PIF3 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC13.07□□□□□ -0.32
NPIPA2E9PIF3 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
NPIPA2E9PIF3 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC13.07□□□□□ -0.32
NPIPA2E9PIF3 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC13.07□□□□□ -0.32
NPIPA2E9PIF3 RN7SL258P-201ENST00000478664 300 ntBASIC13.07□□□□□ -0.32
NPIPA2E9PIF3 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
NPIPA2E9PIF3 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
NPIPA2E9PIF3 RN7SL67P-201ENST00000492147 296 ntBASIC13.07□□□□□ -0.32
NPIPA2E9PIF3 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC13.07□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms