Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 IP6K2-223ENST00000453202 571 ntTSL 4 BASIC17.08■□□□□ 0.32
ZC3H4Q9UPT8 RN7SL672P-201ENST00000474091 317 ntBASIC17.08■□□□□ 0.32
ZC3H4Q9UPT8 SLC25A15P3-201ENST00000505530 290 ntBASIC17.08■□□□□ 0.32
ZC3H4Q9UPT8 AC005586.2-201ENST00000563946 837 ntBASIC17.08■□□□□ 0.32
ZC3H4Q9UPT8 AC126755.5-201ENST00000622756 267 ntBASIC17.08■□□□□ 0.32
ZC3H4Q9UPT8 LINC01588-216ENST00000623502 975 ntTSL 2 BASIC17.08■□□□□ 0.32
ZC3H4Q9UPT8 AL353658.2-201ENST00000629794 519 ntTSL 5 BASIC17.08■□□□□ 0.32
ZC3H4Q9UPT8 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ZC3H4Q9UPT8 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
ZC3H4Q9UPT8 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
ZC3H4Q9UPT8 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
ZC3H4Q9UPT8 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC17.08■□□□□ 0.32
ZC3H4Q9UPT8 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC17.08■□□□□ 0.32
ZC3H4Q9UPT8 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ZC3H4Q9UPT8 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ZC3H4Q9UPT8 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ZC3H4Q9UPT8 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
ZC3H4Q9UPT8 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ZC3H4Q9UPT8 ERP29-202ENST00000455836 1333 ntTSL 2 BASIC17.07■□□□□ 0.32
ZC3H4Q9UPT8 KYAT1-201ENST00000302586 1903 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ZC3H4Q9UPT8 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
ZC3H4Q9UPT8 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC17.07■□□□□ 0.32
ZC3H4Q9UPT8 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
ZC3H4Q9UPT8 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC17.07■□□□□ 0.32
ZC3H4Q9UPT8 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
ZC3H4Q9UPT8 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC17.07■□□□□ 0.32
ZC3H4Q9UPT8 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
ZC3H4Q9UPT8 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ZC3H4Q9UPT8 FLAD1-202ENST00000295530 1211 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ZC3H4Q9UPT8 ATRAID-202ENST00000405489 1059 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ZC3H4Q9UPT8 RPL3P2-204ENST00000413027 1203 ntBASIC17.07■□□□□ 0.32
ZC3H4Q9UPT8 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ZC3H4Q9UPT8 RN7SL351P-201ENST00000469306 248 ntBASIC17.07■□□□□ 0.32
ZC3H4Q9UPT8 AC112484.2-201ENST00000498297 1298 ntTSL 3 BASIC17.07■□□□□ 0.32
ZC3H4Q9UPT8 RPSAP70-201ENST00000504462 864 ntBASIC17.07■□□□□ 0.32
ZC3H4Q9UPT8 MT3-202ENST00000561640 514 ntTSL 3 BASIC17.07■□□□□ 0.32
ZC3H4Q9UPT8 CMC2-204ENST00000562713 573 ntTSL 3 BASIC17.07■□□□□ 0.32
ZC3H4Q9UPT8 CMC2-209ENST00000565108 399 ntTSL 2 BASIC17.07■□□□□ 0.32
ZC3H4Q9UPT8 KRT8P34-201ENST00000577607 1044 ntBASIC17.07■□□□□ 0.32
ZC3H4Q9UPT8 LINC01543-201ENST00000578367 900 ntTSL 5 BASIC17.07■□□□□ 0.32
ZC3H4Q9UPT8 OR3A1-202ENST00000615105 966 ntBASIC17.07■□□□□ 0.32
ZC3H4Q9UPT8 AC026336.4-201ENST00000624565 1050 ntBASIC17.07■□□□□ 0.32
ZC3H4Q9UPT8 AL499606.1-201ENST00000627866 413 ntTSL 3 BASIC17.07■□□□□ 0.32
ZC3H4Q9UPT8 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
ZC3H4Q9UPT8 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ZC3H4Q9UPT8 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
ZC3H4Q9UPT8 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ZC3H4Q9UPT8 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
ZC3H4Q9UPT8 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
ZC3H4Q9UPT8 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ZC3H4Q9UPT8 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
ZC3H4Q9UPT8 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ZC3H4Q9UPT8 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ZC3H4Q9UPT8 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC17.07■□□□□ 0.32
ZC3H4Q9UPT8 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
ZC3H4Q9UPT8 AC087481.3-201ENST00000602886 1894 ntBASIC17.07■□□□□ 0.32
ZC3H4Q9UPT8 CNMD-203ENST00000448904 1444 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ZC3H4Q9UPT8 UBL7-206ENST00000565335 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ZC3H4Q9UPT8 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
ZC3H4Q9UPT8 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC17.06■□□□□ 0.32
ZC3H4Q9UPT8 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ZC3H4Q9UPT8 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ZC3H4Q9UPT8 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ZC3H4Q9UPT8 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ZC3H4Q9UPT8 S100B-201ENST00000291700 877 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ZC3H4Q9UPT8 COA6-203ENST00000366615 710 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ZC3H4Q9UPT8 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ZC3H4Q9UPT8 IGHV1-3-201ENST00000390595 395 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
ZC3H4Q9UPT8 VPREB1-202ENST00000403807 755 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
ZC3H4Q9UPT8 RIC3-205ENST00000425599 867 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ZC3H4Q9UPT8 AC011284.1-201ENST00000427920 856 ntTSL 4 BASIC17.06■□□□□ 0.32
ZC3H4Q9UPT8 CIDEC-205ENST00000443115 443 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ZC3H4Q9UPT8 KRT19P4-201ENST00000443208 943 ntBASIC17.06■□□□□ 0.32
ZC3H4Q9UPT8 CDK4P1-201ENST00000454213 828 ntBASIC17.06■□□□□ 0.32
ZC3H4Q9UPT8 AC008440.1-201ENST00000455835 439 ntTSL 5 BASIC17.06■□□□□ 0.32
ZC3H4Q9UPT8 RN7SL523P-201ENST00000484401 298 ntBASIC17.06■□□□□ 0.32
ZC3H4Q9UPT8 AC022447.5-201ENST00000504817 392 ntBASIC17.06■□□□□ 0.32
ZC3H4Q9UPT8 SRP54-AS1-204ENST00000556705 580 ntTSL 2 BASIC17.06■□□□□ 0.32
ZC3H4Q9UPT8 AC011921.1-201ENST00000559739 557 ntTSL 4 BASIC17.06■□□□□ 0.32
ZC3H4Q9UPT8 AC105133.1-201ENST00000559749 742 ntTSL 3 BASIC17.06■□□□□ 0.32
ZC3H4Q9UPT8 USP32P3-202ENST00000583574 611 ntTSL 3 BASIC17.06■□□□□ 0.32
ZC3H4Q9UPT8 AC092327.2-201ENST00000595705 901 ntTSL 3 BASIC17.06■□□□□ 0.32
ZC3H4Q9UPT8 HCG18-241ENST00000602290 821 ntTSL 2 BASIC17.06■□□□□ 0.32
ZC3H4Q9UPT8 AC090004.1-201ENST00000608606 653 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
ZC3H4Q9UPT8 AC245100.4-201ENST00000634549 1082 ntTSL 5 BASIC17.06■□□□□ 0.32
ZC3H4Q9UPT8 BX322534.1-201ENST00000635574 241 ntBASIC17.06■□□□□ 0.32
ZC3H4Q9UPT8 AC215524.1-201ENST00000635696 241 ntBASIC17.06■□□□□ 0.32
ZC3H4Q9UPT8 HNRNPC-205ENST00000553300 1375 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
ZC3H4Q9UPT8 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
ZC3H4Q9UPT8 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
ZC3H4Q9UPT8 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ZC3H4Q9UPT8 CICP4-201ENST00000447359 2812 ntBASIC17.06■□□□□ 0.32
ZC3H4Q9UPT8 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ZC3H4Q9UPT8 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ZC3H4Q9UPT8 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
ZC3H4Q9UPT8 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
ZC3H4Q9UPT8 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC17.06■□□□□ 0.32
ZC3H4Q9UPT8 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ZC3H4Q9UPT8 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ZC3H4Q9UPT8 TMBIM7P-203ENST00000641617 1718 ntBASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms