Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC13.43□□□□□ -0.26
NUP43Q8NFH3 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC13.43□□□□□ -0.26
NUP43Q8NFH3 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
NUP43Q8NFH3 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
NUP43Q8NFH3 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC13.43□□□□□ -0.26
NUP43Q8NFH3 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
NUP43Q8NFH3 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
NUP43Q8NFH3 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
NUP43Q8NFH3 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
NUP43Q8NFH3 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
NUP43Q8NFH3 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
NUP43Q8NFH3 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
NUP43Q8NFH3 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
NUP43Q8NFH3 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
NUP43Q8NFH3 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
NUP43Q8NFH3 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
NUP43Q8NFH3 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
NUP43Q8NFH3 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC13.42□□□□□ -0.26
NUP43Q8NFH3 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
NUP43Q8NFH3 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
NUP43Q8NFH3 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
NUP43Q8NFH3 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
NUP43Q8NFH3 AC104581.4-201ENST00000623126 3052 ntBASIC13.42□□□□□ -0.26
NUP43Q8NFH3 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
NUP43Q8NFH3 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC13.42□□□□□ -0.26
NUP43Q8NFH3 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC13.42□□□□□ -0.26
NUP43Q8NFH3 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
NUP43Q8NFH3 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
NUP43Q8NFH3 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
NUP43Q8NFH3 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
NUP43Q8NFH3 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
NUP43Q8NFH3 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC13.42□□□□□ -0.26
NUP43Q8NFH3 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
NUP43Q8NFH3 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
NUP43Q8NFH3 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
NUP43Q8NFH3 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
NUP43Q8NFH3 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
NUP43Q8NFH3 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC13.42□□□□□ -0.26
NUP43Q8NFH3 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC13.42□□□□□ -0.26
NUP43Q8NFH3 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC13.42□□□□□ -0.26
NUP43Q8NFH3 CD74-212ENST00000524315 584 ntTSL 5 BASIC13.42□□□□□ -0.26
NUP43Q8NFH3 RIT1-205ENST00000539040 919 ntTSL 2 BASIC13.42□□□□□ -0.26
NUP43Q8NFH3 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC13.42□□□□□ -0.26
NUP43Q8NFH3 AL512310.5-201ENST00000551999 515 ntBASIC13.42□□□□□ -0.26
NUP43Q8NFH3 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC13.42□□□□□ -0.26
NUP43Q8NFH3 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC13.42□□□□□ -0.26
NUP43Q8NFH3 PAM16-211ENST00000575848 518 ntTSL 3 BASIC13.42□□□□□ -0.26
NUP43Q8NFH3 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
NUP43Q8NFH3 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC13.42□□□□□ -0.26
NUP43Q8NFH3 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC13.42□□□□□ -0.26
NUP43Q8NFH3 KLK3-211ENST00000597483 810 ntTSL 2 BASIC13.42□□□□□ -0.26
NUP43Q8NFH3 AP000346.4-201ENST00000614827 381 ntBASIC13.42□□□□□ -0.26
NUP43Q8NFH3 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC13.42□□□□□ -0.26
NUP43Q8NFH3 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
NUP43Q8NFH3 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
NUP43Q8NFH3 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
NUP43Q8NFH3 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
NUP43Q8NFH3 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
NUP43Q8NFH3 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
NUP43Q8NFH3 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
NUP43Q8NFH3 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
NUP43Q8NFH3 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
NUP43Q8NFH3 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
NUP43Q8NFH3 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
NUP43Q8NFH3 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC13.42□□□□□ -0.26
NUP43Q8NFH3 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
NUP43Q8NFH3 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
NUP43Q8NFH3 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
NUP43Q8NFH3 AC018629.1-201ENST00000623381 1736 ntBASIC13.42□□□□□ -0.26
NUP43Q8NFH3 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
NUP43Q8NFH3 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
NUP43Q8NFH3 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
NUP43Q8NFH3 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC13.41□□□□□ -0.26
NUP43Q8NFH3 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
NUP43Q8NFH3 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
NUP43Q8NFH3 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC13.41□□□□□ -0.26
NUP43Q8NFH3 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
NUP43Q8NFH3 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
NUP43Q8NFH3 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC13.41□□□□□ -0.26
NUP43Q8NFH3 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC13.41□□□□□ -0.26
NUP43Q8NFH3 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
NUP43Q8NFH3 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
NUP43Q8NFH3 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
NUP43Q8NFH3 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
NUP43Q8NFH3 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
NUP43Q8NFH3 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
NUP43Q8NFH3 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
NUP43Q8NFH3 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
NUP43Q8NFH3 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC13.41□□□□□ -0.26
NUP43Q8NFH3 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
NUP43Q8NFH3 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
NUP43Q8NFH3 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
NUP43Q8NFH3 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
NUP43Q8NFH3 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
NUP43Q8NFH3 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
NUP43Q8NFH3 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
NUP43Q8NFH3 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
NUP43Q8NFH3 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC13.41□□□□□ -0.26
NUP43Q8NFH3 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
NUP43Q8NFH3 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms