Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TRIM50Q86XT4 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC15.93■□□□□ 0.14
TRIM50Q86XT4 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRIM50Q86XT4 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC15.93■□□□□ 0.14
TRIM50Q86XT4 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRIM50Q86XT4 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRIM50Q86XT4 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC15.93■□□□□ 0.14
TRIM50Q86XT4 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TRIM50Q86XT4 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
TRIM50Q86XT4 NR0B2-201ENST00000254227 1156 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRIM50Q86XT4 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRIM50Q86XT4 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC15.93■□□□□ 0.14
TRIM50Q86XT4 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC15.93■□□□□ 0.14
TRIM50Q86XT4 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC15.93■□□□□ 0.14
TRIM50Q86XT4 AC096649.1-201ENST00000449168 497 ntTSL 3 BASIC15.93■□□□□ 0.14
TRIM50Q86XT4 AL512330.1-201ENST00000456701 349 ntTSL 3 BASIC15.93■□□□□ 0.14
TRIM50Q86XT4 TIMP1-205ENST00000456754 1095 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TRIM50Q86XT4 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC15.93■□□□□ 0.14
TRIM50Q86XT4 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TRIM50Q86XT4 MBP-227ENST00000526111 581 ntTSL 4 BASIC15.93■□□□□ 0.14
TRIM50Q86XT4 AC069185.1-202ENST00000533405 471 ntTSL 3 BASIC15.93■□□□□ 0.14
TRIM50Q86XT4 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC15.93■□□□□ 0.14
TRIM50Q86XT4 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC15.93■□□□□ 0.14
TRIM50Q86XT4 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC15.93■□□□□ 0.14
TRIM50Q86XT4 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC15.93■□□□□ 0.14
TRIM50Q86XT4 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC15.93■□□□□ 0.14
TRIM50Q86XT4 ZNF530-203ENST00000597864 634 ntTSL 2 BASIC15.93■□□□□ 0.14
TRIM50Q86XT4 AP001065.2-201ENST00000617205 644 ntBASIC15.93■□□□□ 0.14
TRIM50Q86XT4 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
TRIM50Q86XT4 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRIM50Q86XT4 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRIM50Q86XT4 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRIM50Q86XT4 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC15.93■□□□□ 0.14
TRIM50Q86XT4 CSF2RA-219ENST00000501036 1622 ntTSL 2 BASIC15.93■□□□□ 0.14
TRIM50Q86XT4 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
TRIM50Q86XT4 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRIM50Q86XT4 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC15.93■□□□□ 0.14
TRIM50Q86XT4 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRIM50Q86XT4 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC15.92■□□□□ 0.14
TRIM50Q86XT4 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC15.92■□□□□ 0.14
TRIM50Q86XT4 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRIM50Q86XT4 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRIM50Q86XT4 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRIM50Q86XT4 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRIM50Q86XT4 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
TRIM50Q86XT4 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC15.92■□□□□ 0.14
TRIM50Q86XT4 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRIM50Q86XT4 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
TRIM50Q86XT4 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TRIM50Q86XT4 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TRIM50Q86XT4 SPACA3-201ENST00000269053 817 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRIM50Q86XT4 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRIM50Q86XT4 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC15.92■□□□□ 0.14
TRIM50Q86XT4 HLA-DMA-203ENST00000395305 777 ntBASIC15.92■□□□□ 0.14
TRIM50Q86XT4 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TRIM50Q86XT4 AL512306.1-201ENST00000432698 848 ntBASIC15.92■□□□□ 0.14
TRIM50Q86XT4 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC15.92■□□□□ 0.14
TRIM50Q86XT4 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC15.92■□□□□ 0.14
TRIM50Q86XT4 C12orf10-207ENST00000549488 840 ntTSL 5 BASIC15.92■□□□□ 0.14
TRIM50Q86XT4 FKBP11-212ENST00000552878 1052 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
TRIM50Q86XT4 AC138701.2-201ENST00000553634 226 ntBASIC15.92■□□□□ 0.14
TRIM50Q86XT4 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRIM50Q86XT4 SMIM6-201ENST00000556126 866 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
TRIM50Q86XT4 AL845331.2-201ENST00000561882 1044 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
TRIM50Q86XT4 SKA2-205ENST00000580541 689 ntTSL 3 BASIC15.92■□□□□ 0.14
TRIM50Q86XT4 SPACA3-205ENST00000580599 949 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRIM50Q86XT4 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC15.92■□□□□ 0.14
TRIM50Q86XT4 ASNSD1-206ENST00000607062 968 ntTSL 5 BASIC15.92■□□□□ 0.14
TRIM50Q86XT4 Metazoa_SRP.96-201ENST00000621315 318 ntBASIC15.92■□□□□ 0.14
TRIM50Q86XT4 AL161773.1-201ENST00000624845 863 ntBASIC15.92■□□□□ 0.14
TRIM50Q86XT4 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC15.92■□□□□ 0.14
TRIM50Q86XT4 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TRIM50Q86XT4 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRIM50Q86XT4 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
TRIM50Q86XT4 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRIM50Q86XT4 SERF2-201ENST00000249786 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRIM50Q86XT4 AC006372.4-201ENST00000624122 1543 ntBASIC15.92■□□□□ 0.14
TRIM50Q86XT4 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRIM50Q86XT4 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRIM50Q86XT4 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRIM50Q86XT4 USP28-214ENST00000545540 3431 ntTSL 2 BASIC15.92■□□□□ 0.14
TRIM50Q86XT4 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRIM50Q86XT4 IL9RP3-201ENST00000442856 1674 ntBASIC15.92■□□□□ 0.14
TRIM50Q86XT4 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC15.92■□□□□ 0.14
TRIM50Q86XT4 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TRIM50Q86XT4 SLC25A20-202ENST00000430379 1576 ntTSL 3 BASIC15.92■□□□□ 0.14
TRIM50Q86XT4 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRIM50Q86XT4 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRIM50Q86XT4 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TRIM50Q86XT4 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC15.91■□□□□ 0.14
TRIM50Q86XT4 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRIM50Q86XT4 SLC25A19-205ENST00000442286 1496 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
TRIM50Q86XT4 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC15.91■□□□□ 0.14
TRIM50Q86XT4 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRIM50Q86XT4 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRIM50Q86XT4 MIR22HG-201ENST00000334146 1383 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TRIM50Q86XT4 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC15.91■□□□□ 0.14
TRIM50Q86XT4 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRIM50Q86XT4 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRIM50Q86XT4 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC15.91■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms