Protein–RNA interactions for Protein: P60507

ERVFC1, Endogenous retrovirus group FC1 Env polyprotein, humanhuman

Predictions only

Length 584 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1P60507 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ERVFC1P60507 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ERVFC1P60507 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ERVFC1P60507 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
ERVFC1P60507 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ERVFC1P60507 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ERVFC1P60507 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC14.88□□□□□ -0.03
ERVFC1P60507 GEMIN8P4-201ENST00000380526 729 ntBASIC14.88□□□□□ -0.03
ERVFC1P60507 AL357373.1-201ENST00000394974 322 ntBASIC14.88□□□□□ -0.03
ERVFC1P60507 KRTAP10-5-201ENST00000400372 1150 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
ERVFC1P60507 OR2W2P-201ENST00000406313 909 ntBASIC14.88□□□□□ -0.03
ERVFC1P60507 COPS7B-204ENST00000409091 806 ntTSL 5 BASIC14.88□□□□□ -0.03
ERVFC1P60507 AL080243.1-201ENST00000423293 1060 ntBASIC14.88□□□□□ -0.03
ERVFC1P60507 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC14.88□□□□□ -0.03
ERVFC1P60507 GS1-124K5.4-201ENST00000445681 540 ntTSL 2 BASIC14.88□□□□□ -0.03
ERVFC1P60507 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC14.88□□□□□ -0.03
ERVFC1P60507 AL451000.1-201ENST00000451300 1186 ntBASIC14.88□□□□□ -0.03
ERVFC1P60507 FKBP1B-205ENST00000452109 953 ntTSL 3 BASIC14.88□□□□□ -0.03
ERVFC1P60507 AC092903.1-201ENST00000466506 262 ntBASIC14.88□□□□□ -0.03
ERVFC1P60507 C21orf62-204ENST00000490358 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ERVFC1P60507 UBR5-AS1-202ENST00000520820 800 ntTSL 2 BASIC14.88□□□□□ -0.03
ERVFC1P60507 C10orf113-201ENST00000529198 614 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
ERVFC1P60507 EHF-208ENST00000530286 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ERVFC1P60507 AP000866.5-201ENST00000531241 445 ntTSL 5 BASIC14.88□□□□□ -0.03
ERVFC1P60507 F11R-204ENST00000537746 1245 ntTSL 2 BASIC14.88□□□□□ -0.03
ERVFC1P60507 AC005845.1-201ENST00000539206 653 ntTSL 3 BASIC14.88□□□□□ -0.03
ERVFC1P60507 LINC02252-201ENST00000565706 487 ntTSL 3 BASIC14.88□□□□□ -0.03
ERVFC1P60507 AC006547.3-201ENST00000600090 583 ntTSL 3 BASIC14.88□□□□□ -0.03
ERVFC1P60507 CCL3L3-203ENST00000619989 784 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ERVFC1P60507 RARS-210ENST00000626454 177 ntTSL 5 BASIC14.88□□□□□ -0.03
ERVFC1P60507 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
ERVFC1P60507 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC14.88□□□□□ -0.03
ERVFC1P60507 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC14.88□□□□□ -0.03
ERVFC1P60507 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ERVFC1P60507 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
ERVFC1P60507 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
ERVFC1P60507 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
ERVFC1P60507 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ERVFC1P60507 AC093797.1-201ENST00000411847 1789 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
ERVFC1P60507 ATP5A1-201ENST00000282050 1945 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
ERVFC1P60507 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC14.88□□□□□ -0.03
ERVFC1P60507 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC14.88□□□□□ -0.03
ERVFC1P60507 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC14.88□□□□□ -0.03
ERVFC1P60507 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
ERVFC1P60507 RPF1-201ENST00000370654 1385 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ERVFC1P60507 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
ERVFC1P60507 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC14.87□□□□□ -0.03
ERVFC1P60507 AL022313.4-201ENST00000562756 2046 ntBASIC14.87□□□□□ -0.03
ERVFC1P60507 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
ERVFC1P60507 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ERVFC1P60507 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC14.87□□□□□ -0.03
ERVFC1P60507 C20orf96-202ENST00000382369 1420 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
ERVFC1P60507 CERCAM-214ENST00000613052 1429 ntTSL 5 BASIC14.87□□□□□ -0.03
ERVFC1P60507 RPL10-202ENST00000369817 1284 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
ERVFC1P60507 TRAPPC3-201ENST00000373159 590 ntTSL 3 BASIC14.87□□□□□ -0.03
ERVFC1P60507 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC14.87□□□□□ -0.03
ERVFC1P60507 LINP1-201ENST00000417112 917 ntTSL 2 BASIC14.87□□□□□ -0.03
ERVFC1P60507 SIX3-AS1-201ENST00000419364 844 ntTSL 2 BASIC14.87□□□□□ -0.03
ERVFC1P60507 DEPDC1-AS1-201ENST00000428732 1247 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
ERVFC1P60507 LRRC75A-AS1-214ENST00000487066 763 ntTSL 3 BASIC14.87□□□□□ -0.03
ERVFC1P60507 BAK1P2-201ENST00000532665 631 ntBASIC14.87□□□□□ -0.03
ERVFC1P60507 IGHV3OR15-7-201ENST00000558565 359 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
ERVFC1P60507 ADAMTS9-AS1-216ENST00000626280 882 ntTSL 5 BASIC14.87□□□□□ -0.03
ERVFC1P60507 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ERVFC1P60507 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ERVFC1P60507 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
ERVFC1P60507 MARS-233ENST00000628866 2583 ntTSL 5 BASIC14.87□□□□□ -0.03
ERVFC1P60507 KCNIP1-210ENST00000636734 1613 ntTSL 5 BASIC14.87□□□□□ -0.03
ERVFC1P60507 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ERVFC1P60507 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ERVFC1P60507 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
ERVFC1P60507 CHRNA1-203ENST00000409219 1466 ntTSL 3 BASIC14.87□□□□□ -0.03
ERVFC1P60507 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
ERVFC1P60507 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
ERVFC1P60507 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
ERVFC1P60507 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC14.87□□□□□ -0.03
ERVFC1P60507 POR-201ENST00000394893 2532 ntTSL 5 BASIC14.87□□□□□ -0.03
ERVFC1P60507 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
ERVFC1P60507 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC14.87□□□□□ -0.03
ERVFC1P60507 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ERVFC1P60507 PGD-201ENST00000270776 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
ERVFC1P60507 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
ERVFC1P60507 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
ERVFC1P60507 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
ERVFC1P60507 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
ERVFC1P60507 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC14.86□□□□□ -0.03
ERVFC1P60507 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
ERVFC1P60507 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
ERVFC1P60507 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
ERVFC1P60507 MKRN2-202ENST00000411987 1436 ntTSL 2 BASIC14.86□□□□□ -0.03
ERVFC1P60507 DUT-208ENST00000559540 1441 ntTSL 2 BASIC14.86□□□□□ -0.03
ERVFC1P60507 HIST1H1D-201ENST00000244534 666 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
ERVFC1P60507 MRPL33-201ENST00000296102 518 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
ERVFC1P60507 DERL3-202ENST00000318109 860 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
ERVFC1P60507 HIST1H2BK-201ENST00000356950 381 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
ERVFC1P60507 PIFO-201ENST00000369737 746 ntTSL 2 BASIC14.86□□□□□ -0.03
ERVFC1P60507 SSR4-202ENST00000370085 526 ntTSL 2 BASIC14.86□□□□□ -0.03
ERVFC1P60507 MRPL33-202ENST00000379666 404 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
ERVFC1P60507 S100A13-203ENST00000392623 579 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
ERVFC1P60507 HNRNPA1P58-201ENST00000403629 610 ntBASIC14.86□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms