Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
RHBDL3P58872 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
RHBDL3P58872 LINC02486-201ENST00000604157 3000 ntBASIC16.66■□□□□ 0.26
RHBDL3P58872 MAGEH1-201ENST00000342972 1462 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
RHBDL3P58872 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RHBDL3P58872 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
RHBDL3P58872 HTR3E-205ENST00000436361 1371 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RHBDL3P58872 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC16.65■□□□□ 0.26
RHBDL3P58872 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RHBDL3P58872 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RHBDL3P58872 ZDHHC6-201ENST00000369404 1721 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RHBDL3P58872 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC16.65■□□□□ 0.26
RHBDL3P58872 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RHBDL3P58872 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RHBDL3P58872 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
RHBDL3P58872 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
RHBDL3P58872 G0S2-201ENST00000367029 866 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RHBDL3P58872 TTPAL-203ENST00000372906 1139 ntTSL 3 BASIC16.65■□□□□ 0.26
RHBDL3P58872 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
RHBDL3P58872 RPL9-203ENST00000449470 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RHBDL3P58872 AL135901.1-201ENST00000451812 333 ntBASIC16.65■□□□□ 0.26
RHBDL3P58872 ZSCAN2-208ENST00000485222 910 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RHBDL3P58872 AC093300.1-201ENST00000510368 1201 ntBASIC16.65■□□□□ 0.26
RHBDL3P58872 COQ10BP2-201ENST00000513804 724 ntBASIC16.65■□□□□ 0.26
RHBDL3P58872 KRT18P37-201ENST00000520711 1282 ntBASIC16.65■□□□□ 0.26
RHBDL3P58872 TMEM126A-203ENST00000528105 656 ntTSL 2 BASIC16.65■□□□□ 0.26
RHBDL3P58872 ZSCAN2-210ENST00000538076 1109 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RHBDL3P58872 AC136944.4-201ENST00000568893 660 ntTSL 4 BASIC16.65■□□□□ 0.26
RHBDL3P58872 AC073592.2-201ENST00000623062 780 ntBASIC16.65■□□□□ 0.26
RHBDL3P58872 GARS-210ENST00000627489 324 ntTSL 4 BASIC16.65■□□□□ 0.26
RHBDL3P58872 CSAG3-203ENST00000638835 793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
RHBDL3P58872 CSAG2-204ENST00000640702 793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
RHBDL3P58872 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RHBDL3P58872 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RHBDL3P58872 GOLGA8EP-201ENST00000530246 1959 ntBASIC16.65■□□□□ 0.26
RHBDL3P58872 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC16.65■□□□□ 0.26
RHBDL3P58872 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
RHBDL3P58872 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RHBDL3P58872 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RHBDL3P58872 ANKRD26P3-201ENST00000454044 2748 ntBASIC16.65■□□□□ 0.26
RHBDL3P58872 SERF1B-204ENST00000506542 1666 ntTSL 3 BASIC16.65■□□□□ 0.26
RHBDL3P58872 ARL1-202ENST00000536227 1322 ntTSL 2 BASIC16.65■□□□□ 0.26
RHBDL3P58872 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RHBDL3P58872 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RHBDL3P58872 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC16.65■□□□□ 0.26
RHBDL3P58872 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
RHBDL3P58872 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RHBDL3P58872 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC16.65■□□□□ 0.26
RHBDL3P58872 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
RHBDL3P58872 DDC-204ENST00000426377 1700 ntTSL 3 BASIC16.65■□□□□ 0.26
RHBDL3P58872 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
RHBDL3P58872 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC16.64■□□□□ 0.25
RHBDL3P58872 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
RHBDL3P58872 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
RHBDL3P58872 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
RHBDL3P58872 AC139749.1-202ENST00000617529 3139 ntBASIC16.64■□□□□ 0.25
RHBDL3P58872 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
RHBDL3P58872 ALG11-203ENST00000523764 1404 ntTSL 2 BASIC16.64■□□□□ 0.25
RHBDL3P58872 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RHBDL3P58872 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RHBDL3P58872 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
RHBDL3P58872 SS18-201ENST00000269137 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RHBDL3P58872 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RHBDL3P58872 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RHBDL3P58872 LY86-202ENST00000379953 1197 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
RHBDL3P58872 SETD7-203ENST00000406354 1127 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RHBDL3P58872 EFNA4-203ENST00000427683 1052 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
RHBDL3P58872 ZMIZ1-AS1-202ENST00000440151 814 ntTSL 3 BASIC16.64■□□□□ 0.25
RHBDL3P58872 Metazoa_SRP.100-201ENST00000447610 282 ntBASIC16.64■□□□□ 0.25
RHBDL3P58872 AC068057.1-201ENST00000453322 709 ntTSL 2 BASIC16.64■□□□□ 0.25
RHBDL3P58872 PRRC2B-207ENST00000458550 899 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RHBDL3P58872 LINC02228-201ENST00000507600 534 ntTSL 2 BASIC16.64■□□□□ 0.25
RHBDL3P58872 CHTF8-204ENST00000518041 567 ntTSL 2 BASIC16.64■□□□□ 0.25
RHBDL3P58872 CD59-210ENST00000528700 652 ntAPPRIS P2 TSL 2 BASIC16.64■□□□□ 0.25
RHBDL3P58872 HIST2H2BF-204ENST00000545683 999 ntTSL 2 BASIC16.64■□□□□ 0.25
RHBDL3P58872 ACSM5-206ENST00000575584 1130 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RHBDL3P58872 ZNF571-AS1-204ENST00000587121 822 ntTSL 3 BASIC16.64■□□□□ 0.25
RHBDL3P58872 SRSF3-208ENST00000620941 869 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
RHBDL3P58872 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC16.64■□□□□ 0.25
RHBDL3P58872 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC16.64■□□□□ 0.25
RHBDL3P58872 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
RHBDL3P58872 CPA5-206ENST00000474905 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RHBDL3P58872 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC16.64■□□□□ 0.25
RHBDL3P58872 SCAF11-203ENST00000395453 1336 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
RHBDL3P58872 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC16.64■□□□□ 0.25
RHBDL3P58872 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
RHBDL3P58872 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RHBDL3P58872 AC090643.2-201ENST00000623442 2029 ntBASIC16.63■□□□□ 0.25
RHBDL3P58872 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC16.63■□□□□ 0.25
RHBDL3P58872 AL365181.1-201ENST00000564032 1828 ntBASIC16.63■□□□□ 0.25
RHBDL3P58872 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC16.63■□□□□ 0.25
RHBDL3P58872 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
RHBDL3P58872 NID2-208ENST00000617139 3827 ntTSL 5 BASIC16.63■□□□□ 0.25
RHBDL3P58872 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
RHBDL3P58872 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RHBDL3P58872 SVOPL-203ENST00000421622 1653 ntTSL 5 BASIC16.63■□□□□ 0.25
RHBDL3P58872 ZSCAN2-202ENST00000327179 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RHBDL3P58872 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
RHBDL3P58872 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RHBDL3P58872 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms