Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CLDN6P56747 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CLDN6P56747 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CLDN6P56747 RBFOX3-203ENST00000580155 1519 ntAPPRIS P2 TSL 2 BASIC13.7□□□□□ -0.22
CLDN6P56747 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CLDN6P56747 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CLDN6P56747 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC13.7□□□□□ -0.22
CLDN6P56747 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC13.7□□□□□ -0.22
CLDN6P56747 AGAP7P-201ENST00000582299 2062 ntBASIC13.7□□□□□ -0.22
CLDN6P56747 AGAP14-201ENST00000624701 2060 ntBASIC13.7□□□□□ -0.22
CLDN6P56747 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CLDN6P56747 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CLDN6P56747 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC13.7□□□□□ -0.22
CLDN6P56747 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CLDN6P56747 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CLDN6P56747 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC13.7□□□□□ -0.22
CLDN6P56747 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CLDN6P56747 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
CLDN6P56747 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC13.7□□□□□ -0.22
CLDN6P56747 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC13.7□□□□□ -0.22
CLDN6P56747 GTF3C6-201ENST00000329970 952 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CLDN6P56747 APOA1-203ENST00000375320 940 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
CLDN6P56747 C11orf49-203ENST00000378618 1166 ntTSL 5 BASIC13.7□□□□□ -0.22
CLDN6P56747 CACNG7-202ENST00000391766 631 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CLDN6P56747 AL158166.1-201ENST00000433110 371 ntTSL 2 BASIC13.7□□□□□ -0.22
CLDN6P56747 AC018638.5-201ENST00000450885 754 ntBASIC13.7□□□□□ -0.22
CLDN6P56747 GNG10P1-201ENST00000452289 199 ntBASIC13.7□□□□□ -0.22
CLDN6P56747 AL355803.1-201ENST00000455524 188 ntTSL 2 BASIC13.7□□□□□ -0.22
CLDN6P56747 RN7SL582P-201ENST00000491078 279 ntBASIC13.7□□□□□ -0.22
CLDN6P56747 RNF216P1-212ENST00000493407 659 ntTSL 3 BASIC13.7□□□□□ -0.22
CLDN6P56747 LINC02228-201ENST00000507600 534 ntTSL 2 BASIC13.7□□□□□ -0.22
CLDN6P56747 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC13.7□□□□□ -0.22
CLDN6P56747 C17orf62-216ENST00000578919 841 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
CLDN6P56747 SNHG15-205ENST00000580458 710 ntTSL 2 BASIC13.7□□□□□ -0.22
CLDN6P56747 AC003043.1-201ENST00000588260 337 ntTSL 3 BASIC13.7□□□□□ -0.22
CLDN6P56747 APOC4-202ENST00000592954 615 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CLDN6P56747 AL133467.4-201ENST00000602953 725 ntBASIC13.7□□□□□ -0.22
CLDN6P56747 AC018695.6-201ENST00000614011 534 ntBASIC13.7□□□□□ -0.22
CLDN6P56747 AL591471.1-201ENST00000621855 229 ntBASIC13.7□□□□□ -0.22
CLDN6P56747 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
CLDN6P56747 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
CLDN6P56747 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC13.7□□□□□ -0.22
CLDN6P56747 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
CLDN6P56747 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
CLDN6P56747 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
CLDN6P56747 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CLDN6P56747 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
CLDN6P56747 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CLDN6P56747 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC13.7□□□□□ -0.22
CLDN6P56747 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC13.7□□□□□ -0.22
CLDN6P56747 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC13.7□□□□□ -0.22
CLDN6P56747 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC13.7□□□□□ -0.22
CLDN6P56747 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CLDN6P56747 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CLDN6P56747 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
CLDN6P56747 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
CLDN6P56747 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CLDN6P56747 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC13.7□□□□□ -0.22
CLDN6P56747 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC13.7□□□□□ -0.22
CLDN6P56747 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CLDN6P56747 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
CLDN6P56747 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
CLDN6P56747 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CLDN6P56747 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CLDN6P56747 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CLDN6P56747 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CLDN6P56747 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
CLDN6P56747 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CLDN6P56747 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
CLDN6P56747 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC13.69□□□□□ -0.22
CLDN6P56747 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CLDN6P56747 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC13.69□□□□□ -0.22
CLDN6P56747 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CLDN6P56747 PSTPIP1-207ENST00000559295 1349 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CLDN6P56747 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CLDN6P56747 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC13.69□□□□□ -0.22
CLDN6P56747 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
CLDN6P56747 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC13.69□□□□□ -0.22
CLDN6P56747 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
CLDN6P56747 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC13.69□□□□□ -0.22
CLDN6P56747 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC13.69□□□□□ -0.22
CLDN6P56747 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC13.69□□□□□ -0.22
CLDN6P56747 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC13.69□□□□□ -0.22
CLDN6P56747 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
CLDN6P56747 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC13.69□□□□□ -0.22
CLDN6P56747 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CLDN6P56747 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CLDN6P56747 PPM1N-205ENST00000401705 771 ntTSL 3 BASIC13.69□□□□□ -0.22
CLDN6P56747 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CLDN6P56747 ACTG1P19-201ENST00000418987 1116 ntBASIC13.69□□□□□ -0.22
CLDN6P56747 ACYP2-204ENST00000422521 1115 ntTSL 5 BASIC13.69□□□□□ -0.22
CLDN6P56747 EMP1-203ENST00000431267 1039 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CLDN6P56747 AC063952.3-201ENST00000467756 308 ntBASIC13.69□□□□□ -0.22
CLDN6P56747 AC108474.1-201ENST00000507776 421 ntTSL 3 BASIC13.69□□□□□ -0.22
CLDN6P56747 NUDCD2-202ENST00000517501 448 ntTSL 5 BASIC13.69□□□□□ -0.22
CLDN6P56747 FXYD6-FXYD2-201ENST00000532984 670 ntTSL 3 BASIC13.69□□□□□ -0.22
CLDN6P56747 NAA40-205ENST00000539656 577 ntTSL 4 BASIC13.69□□□□□ -0.22
CLDN6P56747 ZNF286A-212ENST00000580259 527 ntTSL 4 BASIC13.69□□□□□ -0.22
CLDN6P56747 LINC02018-201ENST00000608169 1268 ntTSL 4 BASIC13.69□□□□□ -0.22
CLDN6P56747 AL356417.2-202ENST00000608986 532 ntTSL 3 BASIC13.69□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms