Protein–RNA interactions for Protein: P52952

NKX2-5, Homeobox protein Nkx-2.5, humanhuman

Predicted RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-5P52952 TRPV1-204ENST00000425167 2607 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
NKX2-5P52952 WIPI1-201ENST00000262139 1832 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
NKX2-5P52952 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
NKX2-5P52952 MYADM-204ENST00000391770 3056 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
NKX2-5P52952 TSPAN9-201ENST00000011898 4323 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
NKX2-5P52952 DCAF6-204ENST00000432587 3522 ntTSL 2 BASIC12.13□□□□□ -0.47
NKX2-5P52952 RFFL-201ENST00000315249 7293 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
NKX2-5P52952 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
NKX2-5P52952 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
NKX2-5P52952 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
NKX2-5P52952 MTMR3-201ENST00000323630 5866 ntTSL 5 BASIC12.13□□□□□ -0.47
NKX2-5P52952 SMARCA2-209ENST00000382203 5867 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
NKX2-5P52952 CARS-201ENST00000278224 2491 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
NKX2-5P52952 NMT2-202ENST00000378165 2907 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
NKX2-5P52952 GRM4-201ENST00000374177 3590 ntTSL 2 BASIC12.13□□□□□ -0.47
NKX2-5P52952 AP1G1-218ENST00000569748 4554 ntAPPRIS P3 TSL 2 BASIC12.13□□□□□ -0.47
NKX2-5P52952 MAP4-204ENST00000395734 5590 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
NKX2-5P52952 ARL4A-203ENST00000396663 3212 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
NKX2-5P52952 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
NKX2-5P52952 LVRN-202ENST00000395528 4544 ntTSL 5 BASIC12.12□□□□□ -0.47
NKX2-5P52952 DMBT1-201ENST00000330163 5802 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
NKX2-5P52952 DMBT1-206ENST00000368956 5802 ntTSL 5 BASIC12.12□□□□□ -0.47
NKX2-5P52952 TESK2-202ENST00000372086 3074 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
NKX2-5P52952 CENPP-201ENST00000375576 3088 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
NKX2-5P52952 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
NKX2-5P52952 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
NKX2-5P52952 HK2P1-201ENST00000447818 2737 ntBASIC12.12□□□□□ -0.47
NKX2-5P52952 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
NKX2-5P52952 SLC3A1-202ENST00000409229 2909 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
NKX2-5P52952 CTRL-205ENST00000574481 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
NKX2-5P52952 NT5C3A-214ENST00000620705 1704 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
NKX2-5P52952 DYRK4-201ENST00000010132 1840 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
NKX2-5P52952 SLC25A24-203ENST00000565488 4271 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
NKX2-5P52952 RPL13-201ENST00000311528 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
NKX2-5P52952 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
NKX2-5P52952 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
NKX2-5P52952 XPC-201ENST00000285021 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
NKX2-5P52952 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
NKX2-5P52952 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
NKX2-5P52952 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC12.12□□□□□ -0.47
NKX2-5P52952 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
NKX2-5P52952 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
NKX2-5P52952 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
NKX2-5P52952 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
NKX2-5P52952 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC12.12□□□□□ -0.47
NKX2-5P52952 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
NKX2-5P52952 FXR1-221ENST00000491674 365 ntTSL 2 BASIC12.12□□□□□ -0.47
NKX2-5P52952 AC106795.1-205ENST00000512851 1056 ntBASIC12.12□□□□□ -0.47
NKX2-5P52952 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC12.12□□□□□ -0.47
NKX2-5P52952 MSRA-206ENST00000521209 814 ntTSL 3 BASIC12.12□□□□□ -0.47
NKX2-5P52952 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
NKX2-5P52952 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC12.12□□□□□ -0.47
NKX2-5P52952 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
NKX2-5P52952 CYGB-205ENST00000590175 830 ntTSL 3 BASIC12.12□□□□□ -0.47
NKX2-5P52952 IL11-204ENST00000590625 1028 ntTSL 2 BASIC12.12□□□□□ -0.47
NKX2-5P52952 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
NKX2-5P52952 MTDHP4-201ENST00000600287 670 ntBASIC12.12□□□□□ -0.47
NKX2-5P52952 LINC02084-201ENST00000606069 1096 ntBASIC12.12□□□□□ -0.47
NKX2-5P52952 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC12.12□□□□□ -0.47
NKX2-5P52952 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC12.12□□□□□ -0.47
NKX2-5P52952 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC12.12□□□□□ -0.47
NKX2-5P52952 ACOX1-201ENST00000293217 7514 ntAPPRIS P5 TSL 1 (best) BASIC12.12□□□□□ -0.47
NKX2-5P52952 APOL3-205ENST00000397293 2214 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
NKX2-5P52952 PLAGL1-209ENST00000444202 3197 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
NKX2-5P52952 TRERF1-202ENST00000354325 4138 ntTSL 5 BASIC12.12□□□□□ -0.47
NKX2-5P52952 PARP3-201ENST00000398755 2336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
NKX2-5P52952 TNNI1-207ENST00000622580 6142 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
NKX2-5P52952 HIRIP3-201ENST00000279392 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
NKX2-5P52952 TSNAXIP1-201ENST00000388833 2429 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
NKX2-5P52952 MRPS16-202ENST00000372945 2634 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
NKX2-5P52952 DDR1-226ENST00000376569 3783 ntAPPRIS P3 TSL 5 BASIC12.12□□□□□ -0.47
NKX2-5P52952 TOMM40L-202ENST00000367988 2708 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
NKX2-5P52952 C1S-221ENST00000617865 2844 ntTSL 5 BASIC12.12□□□□□ -0.47
NKX2-5P52952 AL021392.1-201ENST00000426112 2949 ntTSL 2 BASIC12.12□□□□□ -0.47
NKX2-5P52952 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
NKX2-5P52952 SMG6-203ENST00000536871 1865 ntTSL 2 BASIC12.12□□□□□ -0.47
NKX2-5P52952 CACNA2D3-AS1-201ENST00000471265 2078 ntTSL 2 BASIC12.12□□□□□ -0.47
NKX2-5P52952 ATP4A-201ENST00000262623 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
NKX2-5P52952 HCN3-201ENST00000368358 3718 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
NKX2-5P52952 ELP2-221ENST00000542824 2288 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
NKX2-5P52952 PCDHB15-201ENST00000231173 4017 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
NKX2-5P52952 KPNA4-201ENST00000334256 8981 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
NKX2-5P52952 WDR41-201ENST00000296679 3958 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
NKX2-5P52952 AC073508.3-201ENST00000619697 1419 ntBASIC12.11□□□□□ -0.47
NKX2-5P52952 KDM5B-203ENST00000367265 10345 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
NKX2-5P52952 NRP2-204ENST00000360409 6662 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
NKX2-5P52952 REPS1-205ENST00000415951 2424 ntTSL 5 BASIC12.11□□□□□ -0.47
NKX2-5P52952 SEC24A-201ENST00000322887 2700 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
NKX2-5P52952 ADCY5-201ENST00000309879 2841 ntTSL 2 BASIC12.11□□□□□ -0.47
NKX2-5P52952 PKD2L1-201ENST00000318222 3043 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
NKX2-5P52952 PIP5K1A-203ENST00000368890 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
NKX2-5P52952 NCBP1-202ENST00000375147 5178 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
NKX2-5P52952 PPP1R26P5-201ENST00000416640 3664 ntBASIC12.11□□□□□ -0.47
NKX2-5P52952 CYP11B1-203ENST00000377675 2280 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
NKX2-5P52952 BORA-202ENST00000377815 1673 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
NKX2-5P52952 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
NKX2-5P52952 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
NKX2-5P52952 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
NKX2-5P52952 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
NKX2-5P52952 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms