RNA–Protein interactions for RNA: ENST00000318222.3

PKD2L1-201, Transcript of polycystin 2 like 1, transient receptor potential cation channel, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKD2L1, Length 3,043 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD2L1-201ENST00000318222 NISCHQ9Y2I1 1504 aa23.62■■□□□ 1.37
PKD2L1-201ENST00000318222 SHROOM4Q9ULL8 1493 aa21.22■□□□□ 0.99
PKD2L1-201ENST00000318222 SUPT5HO00267 1087 aaKnown RBP21.01■□□□□ 0.95
PKD2L1-201ENST00000318222 HRCP23327 699 aa20.44■□□□□ 0.86
PKD2L1-201ENST00000318222 PCGF6Q9BYE7 350 aa20.43■□□□□ 0.86
PKD2L1-201ENST00000318222 MYO15BQ96JP2 1530 aa20.42■□□□□ 0.86
PKD2L1-201ENST00000318222 PPARGC1BQ86YN6 1023 aaKnown RBP20.39■□□□□ 0.85
PKD2L1-201ENST00000318222 CHIC1Q5VXU3 224 aa20.34■□□□□ 0.85
PKD2L1-201ENST00000318222 DCAF8L2P0C7V8 631 aa20.32■□□□□ 0.84
PKD2L1-201ENST00000318222 LOC105371045A0A1W2PR82 267 aa20.08■□□□□ 0.8
PKD2L1-201ENST00000318222 ZCCHC6Q5VYS8 1495 aaKnown RBP20■□□□□ 0.79
PKD2L1-201ENST00000318222 EHMT2Q96KQ7 1210 aa19.64■□□□□ 0.73
PKD2L1-201ENST00000318222 TRIM26Q12899 539 aaPredicted RBP19.58■□□□□ 0.73
PKD2L1-201ENST00000318222 DCAF1Q9Y4B6 1507 aa19.56■□□□□ 0.72
PKD2L1-201ENST00000318222 FAM9AQ8IZU1 332 aaPredicted RBP19.51■□□□□ 0.71
PKD2L1-201ENST00000318222 CCDC180Q9P1Z9 1646 aa19.47■□□□□ 0.71
PKD2L1-201ENST00000318222 SCAF1Q9H7N4 1312 aaKnown RBP19.31■□□□□ 0.68
PKD2L1-201ENST00000318222 TRIM41Q8WV44 630 aa19.28■□□□□ 0.68
PKD2L1-201ENST00000318222 ZEB1P37275 1124 aaPredicted RBP19.13■□□□□ 0.65
PKD2L1-201ENST00000318222 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.06■□□□□ 0.64
PKD2L1-201ENST00000318222 TTBK1Q5TCY1 1321 aaPredicted RBP19.05■□□□□ 0.64
PKD2L1-201ENST00000318222 RSF1Q96T23 1441 aaPredicted RBP19.03■□□□□ 0.64
PKD2L1-201ENST00000318222 RB1CC1Q8TDY2 1594 aa18.92■□□□□ 0.62
PKD2L1-201ENST00000318222 SCRIBQ14160 1630 aa18.92■□□□□ 0.62
PKD2L1-201ENST00000318222 ABCC9O60706 1549 aa18.92■□□□□ 0.62
PKD2L1-201ENST00000318222 NEUROD1Q13562 356 aa18.92■□□□□ 0.62
PKD2L1-201ENST00000318222 PELP1Q8IZL8 1130 aaKnown RBP18.91■□□□□ 0.62
PKD2L1-201ENST00000318222 CCER1Q8TC90 406 aaPredicted RBP18.9■□□□□ 0.62
PKD2L1-201ENST00000318222 ACIN1Q9UKV3 1341 aaKnown RBP18.8■□□□□ 0.6
PKD2L1-201ENST00000318222 GTF3C3Q9Y5Q9 886 aa18.77■□□□□ 0.6
PKD2L1-201ENST00000318222 DIEXFQ68CQ4 756 aaKnown RBP18.72■□□□□ 0.59
PKD2L1-201ENST00000318222 CECR2Q9BXF3 1484 aa18.71■□□□□ 0.59
PKD2L1-201ENST00000318222 YTHDC1Q96MU7 727 aaKnown RBP18.63■□□□□ 0.57
PKD2L1-201ENST00000318222 MROH2BQ7Z745 1585 aa18.57■□□□□ 0.56
PKD2L1-201ENST00000318222 CENPBP07199 599 aaPredicted RBP18.51■□□□□ 0.55
PKD2L1-201ENST00000318222 WIZO95785 1651 aa18.48■□□□□ 0.55
PKD2L1-201ENST00000318222 UBTFP17480 764 aaKnown RBP18.39■□□□□ 0.54
PKD2L1-201ENST00000318222 HNRNPUL2Q1KMD3 747 aaKnown RBP18.38■□□□□ 0.53
PKD2L1-201ENST00000318222 ABCC8Q09428 1581 aa18.38■□□□□ 0.53
PKD2L1-201ENST00000318222 CCDC88BA6NC98 1476 aa18.37■□□□□ 0.53
PKD2L1-201ENST00000318222 MIER1Q8N108 512 aa18.36■□□□□ 0.53
PKD2L1-201ENST00000318222 ZNF316A6NFI3 1004 aaPredicted RBP18.35■□□□□ 0.53
PKD2L1-201ENST00000318222 SOGA1O94964 1423 aa18.34■□□□□ 0.53
PKD2L1-201ENST00000318222 CEP162Q5TB80 1403 aa18.33■□□□□ 0.53
PKD2L1-201ENST00000318222 RANGAP1P46060 587 aaPredicted RBP18.32■□□□□ 0.52
PKD2L1-201ENST00000318222 RUSC2Q8N2Y8 1516 aa18.28■□□□□ 0.52
PKD2L1-201ENST00000318222 CSRNP3Q8WYN3 585 aa18.2■□□□□ 0.5
PKD2L1-201ENST00000318222 WRNQ14191 1432 aaPredicted RBP eCLIP18.17■□□□□ 0.5
PKD2L1-201ENST00000318222 EIF4G1Q04637 1599 aaKnown RBP18.14■□□□□ 0.49
PKD2L1-201ENST00000318222 TNIKQ9UKE5 1360 aa18.13■□□□□ 0.49
PKD2L1-201ENST00000318222 BAZ1AQ9NRL2 1556 aaPredicted RBP18.12■□□□□ 0.49
PKD2L1-201ENST00000318222 NACADO15069 1562 aa18.06■□□□□ 0.48
PKD2L1-201ENST00000318222 PABPN1Q86U42 306 aaKnown RBP eCLIP17.98■□□□□ 0.47
PKD2L1-201ENST00000318222 SMARCA2P51531 1590 aa17.96■□□□□ 0.47
PKD2L1-201ENST00000318222 TOP2AP11388 1531 aaKnown RBP17.95■□□□□ 0.46
PKD2L1-201ENST00000318222 MYT1Q01538 1121 aa17.93■□□□□ 0.46
PKD2L1-201ENST00000318222 APLP2Q06481 763 aa17.93■□□□□ 0.46
PKD2L1-201ENST00000318222 GOLGA3Q08378 1498 aa17.92■□□□□ 0.46
PKD2L1-201ENST00000318222 CLIP1P30622 1438 aa17.89■□□□□ 0.45
PKD2L1-201ENST00000318222 SUPT16HQ9Y5B9 1047 aaKnown RBP17.86■□□□□ 0.45
PKD2L1-201ENST00000318222 SMARCA4P51532 1647 aa17.85■□□□□ 0.45
PKD2L1-201ENST00000318222 KCNH8Q96L42 1107 aa17.85■□□□□ 0.45
PKD2L1-201ENST00000318222 ITGAEP38570 1179 aa17.83■□□□□ 0.44
PKD2L1-201ENST00000318222 EEA1Q15075 1411 aa17.81■□□□□ 0.44
PKD2L1-201ENST00000318222 RAPGEF2Q9Y4G8 1499 aa17.79■□□□□ 0.44
PKD2L1-201ENST00000318222 KANK4Q5T7N3 995 aaPredicted RBP17.79■□□□□ 0.44
PKD2L1-201ENST00000318222 BCANQ96GW7 911 aa17.78■□□□□ 0.44
PKD2L1-201ENST00000318222 VPS8Q8N3P4 1428 aa17.76■□□□□ 0.43
PKD2L1-201ENST00000318222 CEP164Q9UPV0 1460 aa17.74■□□□□ 0.43
PKD2L1-201ENST00000318222 SYNJ1O43426 1573 aa17.73■□□□□ 0.43
PKD2L1-201ENST00000318222 DHX57Q6P158 1386 aaKnown RBP17.72■□□□□ 0.43
PKD2L1-201ENST00000318222 TSHZ2Q9NRE2 1034 aa17.7■□□□□ 0.42
PKD2L1-201ENST00000318222 KIF21BO75037 1637 aa17.65■□□□□ 0.42
PKD2L1-201ENST00000318222 HIRIP3Q9BW71 556 aaPredicted RBP17.62■□□□□ 0.41
PKD2L1-201ENST00000318222 UNC13AQ9UPW8 1703 aa17.56■□□□□ 0.4
PKD2L1-201ENST00000318222 DDX10Q13206 875 aaKnown RBP17.56■□□□□ 0.4
PKD2L1-201ENST00000318222 FKBP8Q14318 412 aa17.54■□□□□ 0.4
PKD2L1-201ENST00000318222 SIN3AQ96ST3 1273 aa17.52■□□□□ 0.39
PKD2L1-201ENST00000318222 TRIM52Q96A61 297 aa17.49■□□□□ 0.39
PKD2L1-201ENST00000318222 ANP32EQ9BTT0 268 aa17.48■□□□□ 0.39
PKD2L1-201ENST00000318222 ARAP1Q96P48 1450 aa17.48■□□□□ 0.39
PKD2L1-201ENST00000318222 CLSPNQ9HAW4 1339 aa17.47■□□□□ 0.39
PKD2L1-201ENST00000318222 BAZ1BQ9UIG0 1483 aaKnown RBP17.47■□□□□ 0.39
PKD2L1-201ENST00000318222 CCNB3Q8WWL7 1395 aa17.41■□□□□ 0.38
PKD2L1-201ENST00000318222 ATP1B4Q9UN42 357 aaPredicted RBP17.41■□□□□ 0.38
PKD2L1-201ENST00000318222 RAB3GAP2Q9H2M9 1393 aa17.4■□□□□ 0.38
PKD2L1-201ENST00000318222 ATAD2BQ9ULI0 1458 aa17.4■□□□□ 0.38
PKD2L1-201ENST00000318222 BICRAQ9NZM4 1560 aa17.39■□□□□ 0.37
PKD2L1-201ENST00000318222 FAM50AQ14320 339 aaKnown RBP17.39■□□□□ 0.37
PKD2L1-201ENST00000318222 P3H3Q8IVL6 736 aa17.38■□□□□ 0.37
PKD2L1-201ENST00000318222 RRBP1Q9P2E9 1410 aaKnown RBP17.35■□□□□ 0.37
PKD2L1-201ENST00000318222 PRXQ9BXM0 1461 aa17.34■□□□□ 0.37
PKD2L1-201ENST00000318222 RBM19Q9Y4C8 960 aaKnown RBP17.32■□□□□ 0.36
PKD2L1-201ENST00000318222 IRX6P78412 446 aaPredicted RBP17.31■□□□□ 0.36
PKD2L1-201ENST00000318222 BCL11AQ9H165 835 aa17.31■□□□□ 0.36
PKD2L1-201ENST00000318222 MAPKBP1O60336 1514 aa17.29■□□□□ 0.36
PKD2L1-201ENST00000318222 WDR97A6NE52 1622 aa17.29■□□□□ 0.36
PKD2L1-201ENST00000318222 TOP2BQ02880 1626 aa17.28■□□□□ 0.36
PKD2L1-201ENST00000318222 ARHGAP35Q9NRY4 1499 aa17.28■□□□□ 0.36
PKD2L1-201ENST00000318222 PEG3Q9GZU2 1588 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms