Protein–RNA interactions for Protein: P20337

RAB3B, Ras-related protein Rab-3B, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3BP20337 SESN3-203ENST00000536441 9558 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
RAB3BP20337 PAAF1-201ENST00000310571 4994 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
RAB3BP20337 YLPM1-207ENST00000552421 4899 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
RAB3BP20337 INCENP-202ENST00000394818 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
RAB3BP20337 CNP-202ENST00000393892 5217 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
RAB3BP20337 CSPG4P11-201ENST00000560634 4910 ntBASIC12.62□□□□□ -0.39
RAB3BP20337 FAM193A-201ENST00000324666 4846 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
RAB3BP20337 FAM224B-201ENST00000458667 2032 ntTSL 2 BASIC12.62□□□□□ -0.39
RAB3BP20337 ERAL1-201ENST00000254928 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
RAB3BP20337 ITPRIPL1-204ENST00000439118 1946 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
RAB3BP20337 LMBRD2-201ENST00000296603 8185 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
RAB3BP20337 FAM122B-203ENST00000370790 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
RAB3BP20337 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC12.62□□□□□ -0.39
RAB3BP20337 MATN1-AS1-201ENST00000414532 3925 ntTSL 2 BASIC12.62□□□□□ -0.39
RAB3BP20337 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
RAB3BP20337 AL031719.1-201ENST00000623365 2587 ntBASIC12.62□□□□□ -0.39
RAB3BP20337 PDIA3P1-201ENST00000471856 1510 ntBASIC12.62□□□□□ -0.39
RAB3BP20337 AMT-232ENST00000636199 1546 ntTSL 5 BASIC12.62□□□□□ -0.39
RAB3BP20337 GAB1-202ENST00000262995 7981 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
RAB3BP20337 KIFC3-211ENST00000562903 3221 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
RAB3BP20337 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
RAB3BP20337 VAMP2-201ENST00000316509 2153 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
RAB3BP20337 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
RAB3BP20337 IFT81-202ENST00000361948 3048 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
RAB3BP20337 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
RAB3BP20337 EML5-207ENST00000554922 9570 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
RAB3BP20337 PDGFRB-201ENST00000261799 5717 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
RAB3BP20337 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
RAB3BP20337 USP47-202ENST00000339865 7775 ntTSL 2 BASIC12.61□□□□□ -0.39
RAB3BP20337 CYB5A-202ENST00000340533 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
RAB3BP20337 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
RAB3BP20337 SAP30BP-202ENST00000355423 2439 ntTSL 2 BASIC12.61□□□□□ -0.39
RAB3BP20337 PAX8-204ENST00000397647 3633 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
RAB3BP20337 POLD1-210ENST00000599857 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
RAB3BP20337 AC004623.1-201ENST00000624592 2127 ntBASIC12.61□□□□□ -0.39
RAB3BP20337 NPAS4-201ENST00000311034 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
RAB3BP20337 C1orf167-202ENST00000433342 4545 ntAPPRIS P5 TSL 5 BASIC12.61□□□□□ -0.39
RAB3BP20337 UNC13B-202ENST00000378496 5063 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
RAB3BP20337 AGER-206ENST00000375070 1463 ntTSL 5 BASIC12.61□□□□□ -0.39
RAB3BP20337 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
RAB3BP20337 C8B-201ENST00000371237 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
RAB3BP20337 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
RAB3BP20337 IFT81-201ENST00000242591 3108 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
RAB3BP20337 HPS3-201ENST00000296051 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
RAB3BP20337 MANBAL-201ENST00000373605 1915 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
RAB3BP20337 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC12.61□□□□□ -0.39
RAB3BP20337 ATG4C-201ENST00000317868 2938 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
RAB3BP20337 AC010970.1-201ENST00000445125 1848 ntBASIC12.61□□□□□ -0.39
RAB3BP20337 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
RAB3BP20337 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC12.61□□□□□ -0.39
RAB3BP20337 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC12.61□□□□□ -0.39
RAB3BP20337 CNN2P11-201ENST00000429351 262 ntBASIC12.61□□□□□ -0.39
RAB3BP20337 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC12.61□□□□□ -0.39
RAB3BP20337 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC12.61□□□□□ -0.39
RAB3BP20337 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC12.61□□□□□ -0.39
RAB3BP20337 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC12.61□□□□□ -0.39
RAB3BP20337 AC112482.1-201ENST00000492080 688 ntBASIC12.61□□□□□ -0.39
RAB3BP20337 AC097493.3-201ENST00000509725 367 ntBASIC12.61□□□□□ -0.39
RAB3BP20337 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC12.61□□□□□ -0.39
RAB3BP20337 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC12.61□□□□□ -0.39
RAB3BP20337 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC12.61□□□□□ -0.39
RAB3BP20337 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC12.61□□□□□ -0.39
RAB3BP20337 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC12.61□□□□□ -0.39
RAB3BP20337 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC12.61□□□□□ -0.39
RAB3BP20337 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC12.61□□□□□ -0.39
RAB3BP20337 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC12.61□□□□□ -0.39
RAB3BP20337 AL121827.1-201ENST00000370257 3264 ntTSL 2 BASIC12.61□□□□□ -0.39
RAB3BP20337 EBF3-201ENST00000355311 2993 ntAPPRIS ALT1 TSL 5 BASIC12.61□□□□□ -0.39
RAB3BP20337 KCTD9-201ENST00000221200 3401 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
RAB3BP20337 USP9X-202ENST00000378308 8371 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
RAB3BP20337 TRAK1-210ENST00000613405 4672 ntTSL 2 BASIC12.61□□□□□ -0.39
RAB3BP20337 BAIAP2-202ENST00000321300 2879 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
RAB3BP20337 PRKN-205ENST00000366897 2877 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
RAB3BP20337 NTN4-203ENST00000538383 1971 ntTSL 2 BASIC12.61□□□□□ -0.39
RAB3BP20337 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
RAB3BP20337 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
RAB3BP20337 Z98257.2-202ENST00000641138 1548 ntBASIC12.61□□□□□ -0.39
RAB3BP20337 ZNF419-202ENST00000347466 3654 ntAPPRIS P3 TSL 2 BASIC12.61□□□□□ -0.39
RAB3BP20337 SUGP2-203ENST00000452918 6176 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
RAB3BP20337 CYP2J2-201ENST00000371204 1896 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
RAB3BP20337 TP53INP1-202ENST00000448464 5631 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
RAB3BP20337 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC12.61□□□□□ -0.39
RAB3BP20337 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
RAB3BP20337 TRAF6-202ENST00000526995 4627 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
RAB3BP20337 TNNI1-202ENST00000361379 5413 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
RAB3BP20337 ADCY4-202ENST00000418030 3353 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
RAB3BP20337 PDCD6IPP2-206ENST00000566178 3351 ntTSL 5 BASIC12.61□□□□□ -0.39
RAB3BP20337 OR2C3-204ENST00000641802 8509 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
RAB3BP20337 PHLDB1-201ENST00000356063 5240 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
RAB3BP20337 PDHA1-212ENST00000540249 3277 ntTSL 2 BASIC12.61□□□□□ -0.39
RAB3BP20337 GUCY1B3-205ENST00000505764 2456 ntTSL 2 BASIC12.61□□□□□ -0.39
RAB3BP20337 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
RAB3BP20337 BAIAP3-203ENST00000421665 3875 ntTSL 2 BASIC12.61□□□□□ -0.39
RAB3BP20337 ASB2-201ENST00000315988 2743 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
RAB3BP20337 ADGRA1-201ENST00000392606 3438 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
RAB3BP20337 C1S-202ENST00000360817 2635 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
RAB3BP20337 AGAP2-203ENST00000547588 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
RAB3BP20337 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
RAB3BP20337 SPTSSB-201ENST00000359175 3103 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
RAB3BP20337 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms