Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 APOC3-202ENST00000375345 604 ntTSL 5 BASIC14.58□□□□□ -0.08
NFKB1P19838 KRTAP10-13P-201ENST00000412914 571 ntBASIC14.58□□□□□ -0.08
NFKB1P19838 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC14.58□□□□□ -0.08
NFKB1P19838 RPS2P32-201ENST00000439199 892 ntBASIC14.58□□□□□ -0.08
NFKB1P19838 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC14.58□□□□□ -0.08
NFKB1P19838 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC14.58□□□□□ -0.08
NFKB1P19838 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC14.58□□□□□ -0.08
NFKB1P19838 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC14.58□□□□□ -0.08
NFKB1P19838 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC14.58□□□□□ -0.08
NFKB1P19838 FAM8A2P-201ENST00000528813 1142 ntBASIC14.58□□□□□ -0.08
NFKB1P19838 AL512310.5-201ENST00000551999 515 ntBASIC14.58□□□□□ -0.08
NFKB1P19838 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC14.58□□□□□ -0.08
NFKB1P19838 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC14.58□□□□□ -0.08
NFKB1P19838 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC14.58□□□□□ -0.08
NFKB1P19838 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC14.58□□□□□ -0.08
NFKB1P19838 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
NFKB1P19838 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NFKB1P19838 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
NFKB1P19838 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC14.58□□□□□ -0.08
NFKB1P19838 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC14.58□□□□□ -0.08
NFKB1P19838 AC072061.1-201ENST00000569710 2234 ntBASIC14.58□□□□□ -0.08
NFKB1P19838 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
NFKB1P19838 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
NFKB1P19838 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NFKB1P19838 GOLGA8EP-201ENST00000530246 1959 ntBASIC14.58□□□□□ -0.08
NFKB1P19838 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC14.58□□□□□ -0.08
NFKB1P19838 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NFKB1P19838 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
NFKB1P19838 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
NFKB1P19838 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NFKB1P19838 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NFKB1P19838 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
NFKB1P19838 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NFKB1P19838 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NFKB1P19838 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NFKB1P19838 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC14.57□□□□□ -0.08
NFKB1P19838 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NFKB1P19838 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC14.57□□□□□ -0.08
NFKB1P19838 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
NFKB1P19838 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
NFKB1P19838 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC14.57□□□□□ -0.08
NFKB1P19838 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC14.57□□□□□ -0.08
NFKB1P19838 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NFKB1P19838 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
NFKB1P19838 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NFKB1P19838 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC14.57□□□□□ -0.08
NFKB1P19838 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC14.57□□□□□ -0.08
NFKB1P19838 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
NFKB1P19838 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC14.57□□□□□ -0.08
NFKB1P19838 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NFKB1P19838 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
NFKB1P19838 JTB-202ENST00000356648 1040 ntTSL 2 BASIC14.57□□□□□ -0.08
NFKB1P19838 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NFKB1P19838 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC14.57□□□□□ -0.08
NFKB1P19838 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
NFKB1P19838 PTPA-218ENST00000435132 618 ntTSL 2 BASIC14.57□□□□□ -0.08
NFKB1P19838 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC14.57□□□□□ -0.08
NFKB1P19838 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC14.57□□□□□ -0.08
NFKB1P19838 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC14.57□□□□□ -0.08
NFKB1P19838 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC14.57□□□□□ -0.08
NFKB1P19838 RN7SL163P-201ENST00000583100 276 ntBASIC14.57□□□□□ -0.08
NFKB1P19838 AL033527.4-201ENST00000641026 673 ntBASIC14.57□□□□□ -0.08
NFKB1P19838 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC14.57□□□□□ -0.08
NFKB1P19838 USP39-207ENST00000450066 2086 ntTSL 2 BASIC14.57□□□□□ -0.08
NFKB1P19838 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NFKB1P19838 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC14.57□□□□□ -0.08
NFKB1P19838 CETP-203ENST00000566128 1733 ntTSL 5 BASIC14.57□□□□□ -0.08
NFKB1P19838 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC14.57□□□□□ -0.08
NFKB1P19838 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC14.57□□□□□ -0.08
NFKB1P19838 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NFKB1P19838 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC14.57□□□□□ -0.08
NFKB1P19838 CROT-203ENST00000419147 2959 ntTSL 2 BASIC14.57□□□□□ -0.08
NFKB1P19838 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
NFKB1P19838 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
NFKB1P19838 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NFKB1P19838 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
NFKB1P19838 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
NFKB1P19838 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC14.57□□□□□ -0.08
NFKB1P19838 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
NFKB1P19838 RAN-210ENST00000541630 1475 ntTSL 2 BASIC14.57□□□□□ -0.08
NFKB1P19838 AC007952.5-201ENST00000572818 1486 ntBASIC14.57□□□□□ -0.08
NFKB1P19838 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC14.56□□□□□ -0.08
NFKB1P19838 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NFKB1P19838 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC14.56□□□□□ -0.08
NFKB1P19838 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
NFKB1P19838 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NFKB1P19838 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
NFKB1P19838 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC14.56□□□□□ -0.08
NFKB1P19838 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NFKB1P19838 LSS-211ENST00000522411 2523 ntTSL 2 BASIC14.56□□□□□ -0.08
NFKB1P19838 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
NFKB1P19838 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NFKB1P19838 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
NFKB1P19838 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
NFKB1P19838 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
NFKB1P19838 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NFKB1P19838 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
NFKB1P19838 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
NFKB1P19838 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NFKB1P19838 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 57 ms