Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
UPK2O00526 TKFC-201ENST00000394900 4696 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
UPK2O00526 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.57
UPK2O00526 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC11.52□□□□□ -0.57
UPK2O00526 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC11.52□□□□□ -0.57
UPK2O00526 AC100850.1-201ENST00000506768 649 ntBASIC11.52□□□□□ -0.57
UPK2O00526 AP005018.1-201ENST00000525475 301 ntBASIC11.52□□□□□ -0.57
UPK2O00526 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC11.52□□□□□ -0.57
UPK2O00526 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC11.52□□□□□ -0.57
UPK2O00526 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC11.52□□□□□ -0.57
UPK2O00526 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC11.52□□□□□ -0.57
UPK2O00526 AC124068.2-201ENST00000569473 1109 ntBASIC11.52□□□□□ -0.57
UPK2O00526 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC11.52□□□□□ -0.57
UPK2O00526 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC11.52□□□□□ -0.57
UPK2O00526 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
UPK2O00526 PFAS-212ENST00000625942 396 ntTSL 5 BASIC11.52□□□□□ -0.57
UPK2O00526 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC11.52□□□□□ -0.57
UPK2O00526 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC11.52□□□□□ -0.57
UPK2O00526 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
UPK2O00526 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
UPK2O00526 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC11.52□□□□□ -0.57
UPK2O00526 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
UPK2O00526 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC11.52□□□□□ -0.57
UPK2O00526 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
UPK2O00526 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC11.52□□□□□ -0.57
UPK2O00526 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
UPK2O00526 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
UPK2O00526 ABCC10-204ENST00000372530 5033 ntAPPRIS ALT2 TSL 2 BASIC11.52□□□□□ -0.57
UPK2O00526 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
UPK2O00526 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
UPK2O00526 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
UPK2O00526 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC11.52□□□□□ -0.57
UPK2O00526 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC11.52□□□□□ -0.57
UPK2O00526 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
UPK2O00526 CTR9-201ENST00000361367 4586 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
UPK2O00526 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC11.52□□□□□ -0.57
UPK2O00526 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
UPK2O00526 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC11.52□□□□□ -0.57
UPK2O00526 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
UPK2O00526 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
UPK2O00526 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
UPK2O00526 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
UPK2O00526 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
UPK2O00526 STK3-218ENST00000617590 2485 ntTSL 5 BASIC11.51□□□□□ -0.57
UPK2O00526 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC11.51□□□□□ -0.57
UPK2O00526 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
UPK2O00526 RAB18-208ENST00000611151 4931 ntTSL 5 BASIC11.51□□□□□ -0.57
UPK2O00526 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
UPK2O00526 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
UPK2O00526 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC11.51□□□□□ -0.57
UPK2O00526 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
UPK2O00526 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
UPK2O00526 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC11.51□□□□□ -0.57
UPK2O00526 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC11.51□□□□□ -0.57
UPK2O00526 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
UPK2O00526 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
UPK2O00526 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
UPK2O00526 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
UPK2O00526 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
UPK2O00526 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
UPK2O00526 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC11.51□□□□□ -0.57
UPK2O00526 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
UPK2O00526 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
UPK2O00526 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
UPK2O00526 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
UPK2O00526 GZMB-202ENST00000382540 816 ntTSL 5 BASIC11.51□□□□□ -0.57
UPK2O00526 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
UPK2O00526 AL391647.1-201ENST00000395664 511 ntBASIC11.51□□□□□ -0.57
UPK2O00526 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
UPK2O00526 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC11.51□□□□□ -0.57
UPK2O00526 HMGA1P1-201ENST00000415560 1062 ntBASIC11.51□□□□□ -0.57
UPK2O00526 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
UPK2O00526 RPL7P3-201ENST00000441388 714 ntBASIC11.51□□□□□ -0.57
UPK2O00526 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC11.51□□□□□ -0.57
UPK2O00526 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
UPK2O00526 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC11.51□□□□□ -0.57
UPK2O00526 AC022182.2-201ENST00000525556 859 ntTSL 2 BASIC11.51□□□□□ -0.57
UPK2O00526 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC11.51□□□□□ -0.57
UPK2O00526 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC11.51□□□□□ -0.57
UPK2O00526 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
UPK2O00526 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC11.51□□□□□ -0.57
UPK2O00526 AC009955.4-201ENST00000597192 544 ntBASIC11.51□□□□□ -0.57
UPK2O00526 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
UPK2O00526 AC009884.2-201ENST00000603110 324 ntBASIC11.51□□□□□ -0.57
UPK2O00526 AC090386.2-201ENST00000623010 1039 ntBASIC11.51□□□□□ -0.57
UPK2O00526 CR392039.2-201ENST00000623182 509 ntBASIC11.51□□□□□ -0.57
UPK2O00526 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
UPK2O00526 CCT8L1P-201ENST00000465400 1674 ntBASIC11.51□□□□□ -0.57
UPK2O00526 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
UPK2O00526 AC020658.7-201ENST00000624274 2442 ntBASIC11.51□□□□□ -0.57
UPK2O00526 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
UPK2O00526 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
UPK2O00526 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
UPK2O00526 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
UPK2O00526 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
UPK2O00526 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
UPK2O00526 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
UPK2O00526 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
UPK2O00526 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC11.51□□□□□ -0.57
UPK2O00526 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 74.3 ms