Protein–RNA interactions for Protein: Q9NZI6

TFCP2L1, Transcription factor CP2-like protein 1, humanhuman

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TFCP2L1Q9NZI6 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC29.03■■■□□ 2.24
TFCP2L1Q9NZI6 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC29.03■■■□□ 2.24
TFCP2L1Q9NZI6 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC29.02■■■□□ 2.24
TFCP2L1Q9NZI6 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC29.02■■■□□ 2.24
TFCP2L1Q9NZI6 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC29.02■■■□□ 2.24
TFCP2L1Q9NZI6 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC29.02■■■□□ 2.24
TFCP2L1Q9NZI6 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC29.01■■■□□ 2.24
TFCP2L1Q9NZI6 PKM-203ENST00000389093 2279 ntTSL 5 BASIC29.01■■■□□ 2.24
TFCP2L1Q9NZI6 EMC9-206ENST00000560403 872 ntTSL 2 BASIC29.01■■■□□ 2.23
TFCP2L1Q9NZI6 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.23
TFCP2L1Q9NZI6 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC29.01■■■□□ 2.23
TFCP2L1Q9NZI6 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC29■■■□□ 2.23
TFCP2L1Q9NZI6 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC29■■■□□ 2.23
TFCP2L1Q9NZI6 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC29■■■□□ 2.23
TFCP2L1Q9NZI6 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC29■■■□□ 2.23
TFCP2L1Q9NZI6 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC29■■■□□ 2.23
TFCP2L1Q9NZI6 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC29■■■□□ 2.23
TFCP2L1Q9NZI6 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC29■■■□□ 2.23
TFCP2L1Q9NZI6 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC29■■■□□ 2.23
TFCP2L1Q9NZI6 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC28.99■■■□□ 2.23
TFCP2L1Q9NZI6 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC28.99■■■□□ 2.23
TFCP2L1Q9NZI6 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC28.99■■■□□ 2.23
TFCP2L1Q9NZI6 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC28.99■■■□□ 2.23
TFCP2L1Q9NZI6 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC28.99■■■□□ 2.23
TFCP2L1Q9NZI6 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC28.99■■■□□ 2.23
TFCP2L1Q9NZI6 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC28.99■■■□□ 2.23
TFCP2L1Q9NZI6 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC28.99■■■□□ 2.23
TFCP2L1Q9NZI6 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC28.99■■■□□ 2.23
TFCP2L1Q9NZI6 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
TFCP2L1Q9NZI6 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC28.98■■■□□ 2.23
TFCP2L1Q9NZI6 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC28.98■■■□□ 2.23
TFCP2L1Q9NZI6 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC28.98■■■□□ 2.23
TFCP2L1Q9NZI6 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC28.98■■■□□ 2.23
TFCP2L1Q9NZI6 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
TFCP2L1Q9NZI6 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC28.98■■■□□ 2.23
TFCP2L1Q9NZI6 RAP2CP1-201ENST00000605103 478 ntBASIC28.98■■■□□ 2.23
TFCP2L1Q9NZI6 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC28.97■■■□□ 2.23
TFCP2L1Q9NZI6 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
TFCP2L1Q9NZI6 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC28.97■■■□□ 2.23
TFCP2L1Q9NZI6 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC28.97■■■□□ 2.23
TFCP2L1Q9NZI6 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC28.97■■■□□ 2.23
TFCP2L1Q9NZI6 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC28.97■■■□□ 2.23
TFCP2L1Q9NZI6 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC28.97■■■□□ 2.23
TFCP2L1Q9NZI6 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC28.97■■■□□ 2.23
TFCP2L1Q9NZI6 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC28.97■■■□□ 2.23
TFCP2L1Q9NZI6 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC28.96■■■□□ 2.23
TFCP2L1Q9NZI6 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC28.96■■■□□ 2.23
TFCP2L1Q9NZI6 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC28.96■■■□□ 2.23
TFCP2L1Q9NZI6 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC28.96■■■□□ 2.23
TFCP2L1Q9NZI6 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC28.96■■■□□ 2.23
TFCP2L1Q9NZI6 CDCA4P2-201ENST00000441182 718 ntBASIC28.96■■■□□ 2.23
TFCP2L1Q9NZI6 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
TFCP2L1Q9NZI6 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
TFCP2L1Q9NZI6 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC28.96■■■□□ 2.23
TFCP2L1Q9NZI6 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC28.96■■■□□ 2.23
TFCP2L1Q9NZI6 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC28.96■■■□□ 2.23
TFCP2L1Q9NZI6 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC28.95■■■□□ 2.23
TFCP2L1Q9NZI6 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC28.95■■■□□ 2.23
TFCP2L1Q9NZI6 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC28.95■■■□□ 2.22
TFCP2L1Q9NZI6 AC006015.1-201ENST00000429970 570 ntBASIC28.95■■■□□ 2.22
TFCP2L1Q9NZI6 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC28.95■■■□□ 2.22
TFCP2L1Q9NZI6 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC28.95■■■□□ 2.22
TFCP2L1Q9NZI6 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC28.95■■■□□ 2.22
TFCP2L1Q9NZI6 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC28.95■■■□□ 2.22
TFCP2L1Q9NZI6 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC28.95■■■□□ 2.22
TFCP2L1Q9NZI6 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC28.95■■■□□ 2.22
TFCP2L1Q9NZI6 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC28.95■■■□□ 2.22
TFCP2L1Q9NZI6 AC010501.1-201ENST00000606270 1962 ntBASIC28.95■■■□□ 2.22
TFCP2L1Q9NZI6 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.22
TFCP2L1Q9NZI6 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
TFCP2L1Q9NZI6 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC28.94■■■□□ 2.22
TFCP2L1Q9NZI6 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC28.94■■■□□ 2.22
TFCP2L1Q9NZI6 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
TFCP2L1Q9NZI6 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC28.94■■■□□ 2.22
TFCP2L1Q9NZI6 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC28.94■■■□□ 2.22
TFCP2L1Q9NZI6 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC28.94■■■□□ 2.22
TFCP2L1Q9NZI6 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC28.94■■■□□ 2.22
TFCP2L1Q9NZI6 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC28.94■■■□□ 2.22
TFCP2L1Q9NZI6 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
TFCP2L1Q9NZI6 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC28.94■■■□□ 2.22
TFCP2L1Q9NZI6 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC28.94■■■□□ 2.22
TFCP2L1Q9NZI6 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC28.94■■■□□ 2.22
TFCP2L1Q9NZI6 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
TFCP2L1Q9NZI6 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
TFCP2L1Q9NZI6 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC28.93■■■□□ 2.22
TFCP2L1Q9NZI6 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC28.93■■■□□ 2.22
TFCP2L1Q9NZI6 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC28.93■■■□□ 2.22
TFCP2L1Q9NZI6 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC28.93■■■□□ 2.22
TFCP2L1Q9NZI6 AC073111.5-205ENST00000641717 521 ntBASIC28.93■■■□□ 2.22
TFCP2L1Q9NZI6 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
TFCP2L1Q9NZI6 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC28.92■■■□□ 2.22
TFCP2L1Q9NZI6 NT5C3AP1-201ENST00000394500 1012 ntBASIC28.92■■■□□ 2.22
TFCP2L1Q9NZI6 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC28.92■■■□□ 2.22
TFCP2L1Q9NZI6 AC104771.1-201ENST00000603335 964 ntBASIC28.92■■■□□ 2.22
TFCP2L1Q9NZI6 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
TFCP2L1Q9NZI6 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC28.91■■■□□ 2.22
TFCP2L1Q9NZI6 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC28.91■■■□□ 2.22
TFCP2L1Q9NZI6 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC28.91■■■□□ 2.22
TFCP2L1Q9NZI6 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC28.91■■■□□ 2.22
TFCP2L1Q9NZI6 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC28.91■■■□□ 2.22
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms