Protein–RNA interactions for Protein: Q9NRJ7

PCDHB16, Protocadherin beta-16, humanhuman

Predictions only

Length 776 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16Q9NRJ7 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC19.46■□□□□ 0.71
PCDHB16Q9NRJ7 AC019171.1-201ENST00000601251 1056 ntBASIC19.46■□□□□ 0.71
PCDHB16Q9NRJ7 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC19.46■□□□□ 0.71
PCDHB16Q9NRJ7 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
PCDHB16Q9NRJ7 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PCDHB16Q9NRJ7 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
PCDHB16Q9NRJ7 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PCDHB16Q9NRJ7 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PCDHB16Q9NRJ7 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PCDHB16Q9NRJ7 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
PCDHB16Q9NRJ7 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PCDHB16Q9NRJ7 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PCDHB16Q9NRJ7 MTX2-204ENST00000443241 799 ntTSL 3 BASIC19.45■□□□□ 0.7
PCDHB16Q9NRJ7 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PCDHB16Q9NRJ7 U85056.1-201ENST00000616429 682 ntBASIC19.45■□□□□ 0.7
PCDHB16Q9NRJ7 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PCDHB16Q9NRJ7 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
PCDHB16Q9NRJ7 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PCDHB16Q9NRJ7 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PCDHB16Q9NRJ7 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PCDHB16Q9NRJ7 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCDHB16Q9NRJ7 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PCDHB16Q9NRJ7 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PCDHB16Q9NRJ7 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PCDHB16Q9NRJ7 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC19.44■□□□□ 0.7
PCDHB16Q9NRJ7 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
PCDHB16Q9NRJ7 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCDHB16Q9NRJ7 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCDHB16Q9NRJ7 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC19.44■□□□□ 0.7
PCDHB16Q9NRJ7 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC19.44■□□□□ 0.7
PCDHB16Q9NRJ7 AC129492.7-201ENST00000622992 756 ntBASIC19.44■□□□□ 0.7
PCDHB16Q9NRJ7 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC19.44■□□□□ 0.7
PCDHB16Q9NRJ7 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCDHB16Q9NRJ7 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCDHB16Q9NRJ7 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC19.44■□□□□ 0.7
PCDHB16Q9NRJ7 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCDHB16Q9NRJ7 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCDHB16Q9NRJ7 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCDHB16Q9NRJ7 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
PCDHB16Q9NRJ7 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
PCDHB16Q9NRJ7 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCDHB16Q9NRJ7 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
PCDHB16Q9NRJ7 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCDHB16Q9NRJ7 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCDHB16Q9NRJ7 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC19.43■□□□□ 0.7
PCDHB16Q9NRJ7 AC139795.1-202ENST00000500444 432 ntBASIC19.43■□□□□ 0.7
PCDHB16Q9NRJ7 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCDHB16Q9NRJ7 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
PCDHB16Q9NRJ7 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCDHB16Q9NRJ7 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCDHB16Q9NRJ7 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
PCDHB16Q9NRJ7 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCDHB16Q9NRJ7 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCDHB16Q9NRJ7 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
PCDHB16Q9NRJ7 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PCDHB16Q9NRJ7 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PCDHB16Q9NRJ7 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
PCDHB16Q9NRJ7 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
PCDHB16Q9NRJ7 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PCDHB16Q9NRJ7 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PCDHB16Q9NRJ7 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PCDHB16Q9NRJ7 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC19.42■□□□□ 0.7
PCDHB16Q9NRJ7 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PCDHB16Q9NRJ7 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
PCDHB16Q9NRJ7 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC19.42■□□□□ 0.7
PCDHB16Q9NRJ7 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PCDHB16Q9NRJ7 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC19.42■□□□□ 0.7
PCDHB16Q9NRJ7 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC19.42■□□□□ 0.7
PCDHB16Q9NRJ7 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PCDHB16Q9NRJ7 EI24-213ENST00000618552 1747 ntTSL 5 BASIC19.42■□□□□ 0.7
PCDHB16Q9NRJ7 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
PCDHB16Q9NRJ7 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHB16Q9NRJ7 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHB16Q9NRJ7 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC19.41■□□□□ 0.7
PCDHB16Q9NRJ7 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
PCDHB16Q9NRJ7 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHB16Q9NRJ7 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHB16Q9NRJ7 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHB16Q9NRJ7 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHB16Q9NRJ7 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHB16Q9NRJ7 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC19.41■□□□□ 0.7
PCDHB16Q9NRJ7 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHB16Q9NRJ7 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHB16Q9NRJ7 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
PCDHB16Q9NRJ7 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHB16Q9NRJ7 AC092068.2-201ENST00000590491 1708 ntBASIC19.4■□□□□ 0.7
PCDHB16Q9NRJ7 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHB16Q9NRJ7 RNF165-205ENST00000588679 2904 ntBASIC19.4■□□□□ 0.7
PCDHB16Q9NRJ7 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHB16Q9NRJ7 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHB16Q9NRJ7 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHB16Q9NRJ7 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHB16Q9NRJ7 ANOS2P-203ENST00000472227 1816 ntBASIC19.4■□□□□ 0.7
PCDHB16Q9NRJ7 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHB16Q9NRJ7 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHB16Q9NRJ7 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHB16Q9NRJ7 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHB16Q9NRJ7 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHB16Q9NRJ7 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHB16Q9NRJ7 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 129.7 ms