Protein–RNA interactions for Protein: Q9N2K0

HERV-H_2q24.3 provirus ancestral Env polyprotein, humanhuman

Predictions only

Length 584 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9N2K0 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Q9N2K0 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Q9N2K0 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Q9N2K0 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
Q9N2K0 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Q9N2K0 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Q9N2K0 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Q9N2K0 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Q9N2K0 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Q9N2K0 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC18.89■□□□□ 0.61
Q9N2K0 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC18.89■□□□□ 0.61
Q9N2K0 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC18.89■□□□□ 0.61
Q9N2K0 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Q9N2K0 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC18.88■□□□□ 0.61
Q9N2K0 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Q9N2K0 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Q9N2K0 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Q9N2K0 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Q9N2K0 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Q9N2K0 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC18.88■□□□□ 0.61
Q9N2K0 AC120024.1-201ENST00000562672 995 ntBASIC18.88■□□□□ 0.61
Q9N2K0 ABHD17AP5-201ENST00000580133 923 ntBASIC18.88■□□□□ 0.61
Q9N2K0 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Q9N2K0 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Q9N2K0 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Q9N2K0 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC18.88■□□□□ 0.61
Q9N2K0 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Q9N2K0 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC18.88■□□□□ 0.61
Q9N2K0 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Q9N2K0 IDNK-201ENST00000376417 511 ntTSL 5 BASIC18.87■□□□□ 0.61
Q9N2K0 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Q9N2K0 CLDN5-201ENST00000403084 2357 ntBASIC18.87■□□□□ 0.61
Q9N2K0 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
Q9N2K0 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC18.87■□□□□ 0.61
Q9N2K0 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC18.87■□□□□ 0.61
Q9N2K0 NTF6A-201ENST00000591175 560 ntBASIC18.87■□□□□ 0.61
Q9N2K0 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Q9N2K0 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Q9N2K0 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Q9N2K0 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Q9N2K0 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Q9N2K0 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC18.86■□□□□ 0.61
Q9N2K0 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC18.86■□□□□ 0.61
Q9N2K0 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Q9N2K0 BRD4-212ENST00000630599 726 ntTSL 2 BASIC18.86■□□□□ 0.61
Q9N2K0 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Q9N2K0 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Q9N2K0 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC18.86■□□□□ 0.61
Q9N2K0 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC18.86■□□□□ 0.61
Q9N2K0 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC18.85■□□□□ 0.61
Q9N2K0 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC18.85■□□□□ 0.61
Q9N2K0 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Q9N2K0 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Q9N2K0 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Q9N2K0 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Q9N2K0 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Q9N2K0 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Q9N2K0 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Q9N2K0 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Q9N2K0 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Q9N2K0 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Q9N2K0 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Q9N2K0 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC18.85■□□□□ 0.61
Q9N2K0 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC18.85■□□□□ 0.61
Q9N2K0 BHLHE23-202ENST00000612929 1109 ntBASIC18.85■□□□□ 0.61
Q9N2K0 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Q9N2K0 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Q9N2K0 AF131216.4-201ENST00000638924 1588 ntBASIC18.85■□□□□ 0.61
Q9N2K0 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Q9N2K0 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Q9N2K0 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC18.84■□□□□ 0.61
Q9N2K0 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Q9N2K0 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Q9N2K0 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
Q9N2K0 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Q9N2K0 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Q9N2K0 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Q9N2K0 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Q9N2K0 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Q9N2K0 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Q9N2K0 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Q9N2K0 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Q9N2K0 KRT18P24-201ENST00000344739 1156 ntBASIC18.83■□□□□ 0.6
Q9N2K0 AC074183.2-201ENST00000623112 922 ntBASIC18.83■□□□□ 0.6
Q9N2K0 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Q9N2K0 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Q9N2K0 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Q9N2K0 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Q9N2K0 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC18.83■□□□□ 0.6
Q9N2K0 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC18.83■□□□□ 0.6
Q9N2K0 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Q9N2K0 GCA-201ENST00000233612 1694 ntTSL 2 BASIC18.82■□□□□ 0.6
Q9N2K0 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Q9N2K0 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC18.82■□□□□ 0.6
Q9N2K0 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC18.82■□□□□ 0.6
Q9N2K0 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Q9N2K0 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC18.82■□□□□ 0.6
Q9N2K0 MIR4281-201ENST00000580852 62 ntBASIC18.82■□□□□ 0.6
Q9N2K0 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Q9N2K0 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms